STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000353285_06484Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_000353285_03670
Unannotated protein.
   
 
 0.711
GCA_000353285_04322
Unannotated protein.
   
 
 0.711
GCA_000353285_06483
Unannotated protein.
       0.675
GCA_000353285_06482
Unannotated protein.
       0.582
GCA_000353285_06479
Unannotated protein.
       0.547
GCA_000353285_06480
Unannotated protein.
       0.547
GCA_000353285_06481
Unannotated protein.
       0.547
GCA_000353285_06485
Unannotated protein.
       0.533
Your Current Organism:
Leptolyngbya boryana
NCBI taxonomy Id: 272134
Other names: L. boryana PCC 6306, Leptolyngbya boryana PCC 6306, Leptolyngbya boryana UTEX B 482, Leptolyngbya boryana UTEX B 581, Leptolyngbya sp. ATCC 27894, Leptolyngbya sp. PCC 6306, Plectonema boryanum UTEX B 482, Plectonema boryanum UTEX B 581, Plectonema notatum HMS Z.59.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.