STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_0010.1Putative amino acid transporter. (535 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.699
thsA
Thermosome alpha subunit; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity; Belongs to the TCP-1 chaperonin family.
  
  
 0.677
thsB
Thermosome beta subunit; Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity; Belongs to the TCP-1 chaperonin family.
  
  
 0.677
APE_1968
Carbamate kinase-like carbamoylphosphate synthetase.
  
  
 0.668
glnA
Glutamine synthetase; Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
  
  
 0.663
trpF
N-(5'-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family.
   
 
 0.654
APE_2269.1
Putative MFS transporter.
 
 
 0.647
APE_0972.1
Sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
 
 0.614
APE_0140.1
ATP-dependent universal stress protein.
 
  
 0.612
APE_0763.1
Hypothetical protein.
  
  
 0.601
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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