STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_0056.1enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (250 aa)    
Predicted Functional Partners:
APE_2108
acetyl-CoA acetyltransferase.
  
 0.911
APE_2384
Conserved hypothetical protein.
  
 0.910
APE_2382.1
Conserved hypothetical protein.
  
 0.909
APE_0929.1
Putative 3-ketoacyl-CoA thiolase.
  
 0.904
APE_1872.1
Putative 3-ketoacyl-CoA thiolase.
  
 0.904
citB
Aconitate hydratase; Aconitase.
  
 
 0.804
APE_0739
acyl-CoA dehydrogenase.
 
 0.785
APE_2158.1
acyl-CoA dehydrogenase.
 
 0.768
APE_1681.1
acyl-CoA dehydrogenase.
 
 0.767
rps2p
30S ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.766
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.