STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_0129.1Conserved hypothetical protein. (371 aa)    
Predicted Functional Partners:
APE_0127
Conserved hypothetical protein MoxR.
  
  
 0.845
APE_0125.1
Hypothetical protein.
       0.820
APE_0126.1
Hypothetical protein.
       0.788
APE_0130.1
Hypothetical protein.
       0.773
APE_1035.1
Conserved hypothetical protein.
 
  
 0.559
APE_0122.1
Conserved hypothetical protein.
 
     0.556
APE_0124
Conserved hypothetical protein.
       0.495
APE_0121
Hypothetical protein.
       0.452
APE_1317
Conserved hypothetical protein MoxR.
 
  
 0.421
APE_0605.1
Hypothetical protein.
  
  
 0.405
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.