| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0754.1 | APE_2199.1 | APE_0754.1 | APE_2199.1 | Conserved hypothetical protein. | snoRNA binding protein; aNOP56. | 0.977 |
| APE_0754.1 | csl4 | APE_0754.1 | APE_0445 | Conserved hypothetical protein. | Exosome complex RNA-binding protein Cs14 homologue; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.939 |
| APE_0754.1 | nep1 | APE_0754.1 | APE_0502 | Conserved hypothetical protein. | Ribosome biogenesis protein NEP1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.978 |
| APE_0754.1 | rps11p | APE_0754.1 | APE_1742.1 | Conserved hypothetical protein. | 30S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.961 |
| APE_0754.1 | rps19e | APE_0754.1 | APE_1090 | Conserved hypothetical protein. | 30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. | 0.861 |
| APE_0754.1 | rps3ae | APE_0754.1 | APE_1154.1 | Conserved hypothetical protein. | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.938 |
| APE_0754.1 | rps4p | APE_0754.1 | APE_1739.1 | Conserved hypothetical protein. | 30S ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.978 |
| APE_0754.1 | rps6e | APE_0754.1 | APE_2371.1 | Conserved hypothetical protein. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.960 |
| APE_0754.1 | rps7p | APE_0754.1 | APE_1846.1 | Conserved hypothetical protein. | 30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. | 0.885 |
| APE_0754.1 | rtcA | APE_0754.1 | APE_0511.1 | Conserved hypothetical protein. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity). | 0.945 |
| APE_2199.1 | APE_0754.1 | APE_2199.1 | APE_0754.1 | snoRNA binding protein; aNOP56. | Conserved hypothetical protein. | 0.977 |
| APE_2199.1 | csl4 | APE_2199.1 | APE_0445 | snoRNA binding protein; aNOP56. | Exosome complex RNA-binding protein Cs14 homologue; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.916 |
| APE_2199.1 | nep1 | APE_2199.1 | APE_0502 | snoRNA binding protein; aNOP56. | Ribosome biogenesis protein NEP1; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. | 0.969 |
| APE_2199.1 | rps11p | APE_2199.1 | APE_1742.1 | snoRNA binding protein; aNOP56. | 30S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.960 |
| APE_2199.1 | rps19e | APE_2199.1 | APE_1090 | snoRNA binding protein; aNOP56. | 30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. | 0.887 |
| APE_2199.1 | rps3ae | APE_2199.1 | APE_1154.1 | snoRNA binding protein; aNOP56. | 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.958 |
| APE_2199.1 | rps4p | APE_2199.1 | APE_1739.1 | snoRNA binding protein; aNOP56. | 30S ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.965 |
| APE_2199.1 | rps6e | APE_2199.1 | APE_2371.1 | snoRNA binding protein; aNOP56. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.967 |
| APE_2199.1 | rps7p | APE_2199.1 | APE_1846.1 | snoRNA binding protein; aNOP56. | 30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. | 0.884 |
| APE_2199.1 | rtcA | APE_2199.1 | APE_0511.1 | snoRNA binding protein; aNOP56. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity). | 0.940 |
