Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
APE_0528 | APE_0531.1 | Acetamidase/formamidase. | ABC transporter, substrate binding protein. | 0.635 |
APE_0528 | APE_0532.1 | Acetamidase/formamidase. | ABC transporter, ATP binding protein. | 0.439 |
APE_0528 | APE_0534.1 | Acetamidase/formamidase. | ABC transporter, permease protein. | 0.422 |
APE_0528 | APE_0535 | Acetamidase/formamidase. | Hypothetical protein. | 0.424 |
APE_0528 | APE_1552 | Acetamidase/formamidase. | Truncated ClcA homolog. | 0.463 |
APE_0528 | APE_1555.1 | Acetamidase/formamidase. | Truncated ClcA homolog. | 0.463 |
APE_0531.1 | APE_0528 | ABC transporter, substrate binding protein. | Acetamidase/formamidase. | 0.635 |
APE_0531.1 | APE_0532.1 | ABC transporter, substrate binding protein. | ABC transporter, ATP binding protein. | 0.992 |
APE_0531.1 | APE_0534.1 | ABC transporter, substrate binding protein. | ABC transporter, permease protein. | 0.987 |
APE_0531.1 | APE_0535 | ABC transporter, substrate binding protein. | Hypothetical protein. | 0.604 |
APE_0532.1 | APE_0528 | ABC transporter, ATP binding protein. | Acetamidase/formamidase. | 0.439 |
APE_0532.1 | APE_0531.1 | ABC transporter, ATP binding protein. | ABC transporter, substrate binding protein. | 0.992 |
APE_0532.1 | APE_0534.1 | ABC transporter, ATP binding protein. | ABC transporter, permease protein. | 0.998 |
APE_0532.1 | APE_0535 | ABC transporter, ATP binding protein. | Hypothetical protein. | 0.770 |
APE_0534.1 | APE_0528 | ABC transporter, permease protein. | Acetamidase/formamidase. | 0.422 |
APE_0534.1 | APE_0531.1 | ABC transporter, permease protein. | ABC transporter, substrate binding protein. | 0.987 |
APE_0534.1 | APE_0532.1 | ABC transporter, permease protein. | ABC transporter, ATP binding protein. | 0.998 |
APE_0534.1 | APE_0535 | ABC transporter, permease protein. | Hypothetical protein. | 0.853 |
APE_0535 | APE_0528 | Hypothetical protein. | Acetamidase/formamidase. | 0.424 |
APE_0535 | APE_0531.1 | Hypothetical protein. | ABC transporter, substrate binding protein. | 0.604 |
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