STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_0929.1Putative 3-ketoacyl-CoA thiolase. (397 aa)    
Predicted Functional Partners:
APE_1873.1
HMG-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
 
 0.995
APE_1484.1
3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase.
 
 0.992
APE_0930.1
Conserved hypothetical protein.
 
 
 0.957
acsA-2
Acetyl-coenzyme A synthetase.
  
 
 0.956
acsA-3
Acetyl-coenzyme A synthetase.
  
 
 0.956
APE_1871.1
Conserved hypothetical protein AcaC.
 
 
 0.955
acsA
Acetyl-coenzyme A synthetase.
  
 
 0.952
gltA
Citrate synthase.
  
 0.942
pdhC
Pyruvate dehydrogenase complex, E2 component; Dihydrolipoyllysine-residue acetyltransferase component.
  
 
 0.925
APE_2382.1
Conserved hypothetical protein.
  
  
 
0.923
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
Server load: low (22%) [HD]