Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APE_0929.1 | APE_0930.1 | APE_0929.1 | APE_0930.1 | Putative 3-ketoacyl-CoA thiolase. | Conserved hypothetical protein. | 0.957 |
APE_0929.1 | APE_1484.1 | APE_0929.1 | APE_1484.1 | Putative 3-ketoacyl-CoA thiolase. | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | 0.992 |
APE_0929.1 | APE_1871.1 | APE_0929.1 | APE_1871.1 | Putative 3-ketoacyl-CoA thiolase. | Conserved hypothetical protein AcaC. | 0.955 |
APE_0929.1 | APE_1873.1 | APE_0929.1 | APE_1873.1 | Putative 3-ketoacyl-CoA thiolase. | HMG-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family. | 0.995 |
APE_0929.1 | APE_2382.1 | APE_0929.1 | APE_2382.1 | Putative 3-ketoacyl-CoA thiolase. | Conserved hypothetical protein. | 0.923 |
APE_0929.1 | acsA | APE_0929.1 | APE_1346.1 | Putative 3-ketoacyl-CoA thiolase. | Acetyl-coenzyme A synthetase. | 0.952 |
APE_0929.1 | acsA-2 | APE_0929.1 | APE_2604 | Putative 3-ketoacyl-CoA thiolase. | Acetyl-coenzyme A synthetase. | 0.956 |
APE_0929.1 | acsA-3 | APE_0929.1 | APE_2604a.1 | Putative 3-ketoacyl-CoA thiolase. | Acetyl-coenzyme A synthetase. | 0.956 |
APE_0929.1 | gltA | APE_0929.1 | APE_1713 | Putative 3-ketoacyl-CoA thiolase. | Citrate synthase. | 0.942 |
APE_0929.1 | pdhC | APE_0929.1 | APE_1671 | Putative 3-ketoacyl-CoA thiolase. | Pyruvate dehydrogenase complex, E2 component; Dihydrolipoyllysine-residue acetyltransferase component. | 0.925 |
APE_0930.1 | APE_0929.1 | APE_0930.1 | APE_0929.1 | Conserved hypothetical protein. | Putative 3-ketoacyl-CoA thiolase. | 0.957 |
APE_0930.1 | APE_1484.1 | APE_0930.1 | APE_1484.1 | Conserved hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | 0.542 |
APE_0930.1 | APE_1873.1 | APE_0930.1 | APE_1873.1 | Conserved hypothetical protein. | HMG-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family. | 0.904 |
APE_0930.1 | APE_2382.1 | APE_0930.1 | APE_2382.1 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.835 |
APE_1484.1 | APE_0929.1 | APE_1484.1 | APE_0929.1 | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | Putative 3-ketoacyl-CoA thiolase. | 0.992 |
APE_1484.1 | APE_0930.1 | APE_1484.1 | APE_0930.1 | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | Conserved hypothetical protein. | 0.542 |
APE_1484.1 | APE_2382.1 | APE_1484.1 | APE_2382.1 | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | Conserved hypothetical protein. | 0.991 |
APE_1484.1 | acsA | APE_1484.1 | APE_1346.1 | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | Acetyl-coenzyme A synthetase. | 0.604 |
APE_1484.1 | acsA-2 | APE_1484.1 | APE_2604 | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | Acetyl-coenzyme A synthetase. | 0.611 |
APE_1484.1 | acsA-3 | APE_1484.1 | APE_2604a.1 | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | Acetyl-coenzyme A synthetase. | 0.604 |
page 1 of 4