STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_0972.1Sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (490 aa)    
Predicted Functional Partners:
cstA
Carbon starvation protein A.
 
    0.847
APE_1891.1
ABC transporter, ATP binding protein.
  
  
 0.745
APE_0163.1
Conserved hypothetical protein.
  
  
 0.733
APE_0807.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.733
gapN
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.733
gltA
Citrate synthase.
  
  
 0.714
APE_2538
Probable Na(+)/H(+) antiporter.
 
  
 0.713
APE_2583.1
Proton glutamate symport protein.
  
  
 0.684
APE_0060.1
Conserved hypothetical protein.
   
  
 0.674
APE_1080.1
Conserved hypothetical protein.
   
  
 0.674
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.