STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_1003.1Hypothetical protein. (530 aa)    
Predicted Functional Partners:
APE_1001.1
Hypothetical protein.
       0.732
APE_0996a
Hypothetical protein.
       0.612
APE_1000.1
Hypothetical protein.
       0.612
APE_1007.1
Hypothetical protein.
       0.549
APE_0996.1
Glycerate kinase.
       0.514
APE_0340.1
Hypothetical protein.
  
     0.472
APE_0035.1
ABC transporter, substrate binding protein.
  
     0.460
APE_1007a
Hypothetical protein.
       0.440
APE_0416.1
Conserved hypothetical protein.
  
     0.400
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.