STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_1189.1Glycosyl transferase, family 2. (283 aa)    
Predicted Functional Partners:
APE_1184
Glycosyl transferase, family 2.
 
  
 0.872
APE_1186.1
Hypothetical protein.
  
 
 0.848
APE_1188
Glycosyl transferase, group 1.
  
 
 0.848
APE_1187.1
Hypothetical protein.
       0.776
APE_1190.1
Hypothetical protein.
 
 
 
 0.752
APE_1191
Glycosyl transferase, group 1.
 
 
 0.745
APE_1192
Glycosyl transferase, family 2.
 
   
 0.569
APE_2066.1
Glycosyl transferase, group 1.
 
 
 0.521
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
 
 
 0.481
APE_0763.1
Hypothetical protein.
  
 
 0.452
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.