Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APE_1415NuoM homolog. (513 aa)    
Predicted Functional Partners:
APE_1411.1
NuoL homolog.
 
0.999
APE_1419.1
NuoI homolog.
 
 0.997
APE_1422
NuoD homolog.
 
  0.994
APE_1428.1
NuoB homolog; Belongs to the complex I 20 kDa subunit family.
 
 
 0.993
APE_1426
NuoC homolog.
 
 
 0.992
APE_1410.1
NuoN homolog.
 
 
0.988
APE_1418.1
NuoJ homolog.
    
 0.985
APE_1417.1
NuoK homolog.
    
  0.977
APE_1430.1
NuoA homolog.
    
 0.975
APE_1421.1
NuoH homolog.
 
   
 0.932
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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