STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE_1722aConserved hypothetical protein. (158 aa)    
Predicted Functional Partners:
soxC
Cytochrome b.
   
 
 0.841
APE_1720
Cytochrome c oxidase (ba3-type) subunit II.
  
   0.827
soxL
Rieske iron-sulfur protein.
   
 
 0.777
APE_2563
Probable arsenite oxidase small subunit precursor.
   
 
 0.777
aoxB
Cytochrome c oxidase (aa3-type) subunit I+III; In the C-terminal section; belongs to the cytochrome c oxidase subunit 3 family.
  
   0.764
APE_1623
Cytochrome c oxidase (ba3-type) subunit I; Belongs to the heme-copper respiratory oxidase family.
  
   0.764
aoxA
Cytochrome c oxidase (aa3-type) subunit II.
  
   0.761
APE_1722
Thioredoxin.
   
 
 0.637
APE_1721
Putative SCO1 protein.
     
 0.574
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.