Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APE_2078Conserved hypothetical protein; Belongs to the UbiD family. (437 aa)    
Predicted Functional Partners:
ubiX
Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
 0.992
APE_1768.1
Isopentenyl phosphate kinase.
 
  
  0.916
APE_2077.1
Hypothetical protein.
       0.801
nudF-2
ADP-ribose diphosphatase; ADPR-PPase.
       0.715
APE_2087.1
Putative aconitase, subunit.
 
     0.684
APE_2089
Putative aconitase, subunit; Belongs to the UPF0107 family.
 
     0.668
tmk
dTMP kinase.
       0.527
APE_2081.1
Aminopeptidase.
       0.520
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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