Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0072 | cobA | APE_0072 | APE_0236.1 | Heme exporter protein C. | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | 0.699 |
| APE_0072 | hemA | APE_0072 | APE_2296 | Heme exporter protein C. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.710 |
| APE_0072 | hemB | APE_0072 | APE_2300.1 | Heme exporter protein C. | Porphobilinogen synthase; ALADH; delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.528 |
| APE_0072 | hemC | APE_0072 | APE_2298.1 | Heme exporter protein C. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.659 |
| APE_0072 | hemL | APE_0072 | APE_2130.1 | Heme exporter protein C. | Glutamate-1-semialdehyde aminotransferase; GSA; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.444 |
| APE_0072 | hemL-2 | APE_0072 | APE_2299.1 | Heme exporter protein C. | Glutamate-1-semialdehyde aminotransferase; GSA; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.444 |
| APE_2295.1 | hemA | APE_2295.1 | APE_2296 | Conserved hypothetical protein. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.605 |
| APE_2295.1 | hemB | APE_2295.1 | APE_2300.1 | Conserved hypothetical protein. | Porphobilinogen synthase; ALADH; delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.533 |
| APE_2295.1 | hemC | APE_2295.1 | APE_2298.1 | Conserved hypothetical protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.605 |
| APE_2295.1 | hemL-2 | APE_2295.1 | APE_2299.1 | Conserved hypothetical protein. | Glutamate-1-semialdehyde aminotransferase; GSA; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.605 |
| cobA | APE_0072 | APE_0236.1 | APE_0072 | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | Heme exporter protein C. | 0.699 |
| cobA | hemA | APE_0236.1 | APE_2296 | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.727 |
| cobA | hemB | APE_0236.1 | APE_2300.1 | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | Porphobilinogen synthase; ALADH; delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.832 |
| cobA | hemC | APE_0236.1 | APE_2298.1 | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.987 |
| cobA | hemD | APE_0236.1 | APE_1493 | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | Putative uroporphyrinogen-III synthase; UROS. | 0.900 |
| cobA | sirC | APE_0236.1 | APE_1491.1 | uroporphyrin-III C-methyltransferase; SUMT; Belongs to the precorrin methyltransferase family. | Precorrin-2 dehydrogenase. | 0.989 |
| fgs | hemC | APE_1764.1 | APE_2298.1 | Farnesylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.728 |
| fgs | sirC | APE_1764.1 | APE_1491.1 | Farnesylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Precorrin-2 dehydrogenase. | 0.451 |
| hemA | APE_0072 | APE_2296 | APE_0072 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Heme exporter protein C. | 0.710 |
| hemA | APE_2295.1 | APE_2296 | APE_2295.1 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Conserved hypothetical protein. | 0.605 |
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