Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0510.1 | APE_0537.1 | APE_0510.1 | APE_0537.1 | Putative GTP-binding protein. | Conserved hypothetical protein. | 0.403 |
| APE_0510.1 | APE_1835 | APE_0510.1 | APE_1835 | Putative GTP-binding protein. | Putative methyltransferase. | 0.734 |
| APE_0510.1 | APE_2486.1 | APE_0510.1 | APE_2486.1 | Putative GTP-binding protein. | tRNA (m1A) methyltransferase. | 0.747 |
| APE_0510.1 | ksgA | APE_0510.1 | APE_0553 | Putative GTP-binding protein. | S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity). Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.820 |
| APE_0510.1 | rpl30p | APE_0510.1 | APE_0345.1 | Putative GTP-binding protein. | 50S ribosomal protein L30P. | 0.974 |
| APE_0510.1 | rps8e | APE_0510.1 | APE_0789 | Putative GTP-binding protein. | 30S ribosomal protein S8e. | 0.999 |
| APE_0510.1 | rtcA | APE_0510.1 | APE_0511.1 | Putative GTP-binding protein. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity). | 0.779 |
| APE_0510.1 | tmcA | APE_0510.1 | APE_1543 | Putative GTP-binding protein. | Conserved hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.825 |
| APE_0537.1 | APE_0510.1 | APE_0537.1 | APE_0510.1 | Conserved hypothetical protein. | Putative GTP-binding protein. | 0.403 |
| APE_0537.1 | APE_2486.1 | APE_0537.1 | APE_2486.1 | Conserved hypothetical protein. | tRNA (m1A) methyltransferase. | 0.741 |
| APE_0537.1 | rps8e | APE_0537.1 | APE_0789 | Conserved hypothetical protein. | 30S ribosomal protein S8e. | 0.477 |
| APE_1835 | APE_0510.1 | APE_1835 | APE_0510.1 | Putative methyltransferase. | Putative GTP-binding protein. | 0.734 |
| APE_1835 | APE_2486.1 | APE_1835 | APE_2486.1 | Putative methyltransferase. | tRNA (m1A) methyltransferase. | 0.742 |
| APE_1835 | ksgA | APE_1835 | APE_0553 | Putative methyltransferase. | S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity). Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.619 |
| APE_1835 | rpl30p | APE_1835 | APE_0345.1 | Putative methyltransferase. | 50S ribosomal protein L30P. | 0.507 |
| APE_1835 | rps8e | APE_1835 | APE_0789 | Putative methyltransferase. | 30S ribosomal protein S8e. | 0.564 |
| APE_1835 | rtcA | APE_1835 | APE_0511.1 | Putative methyltransferase. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity). | 0.729 |
| APE_1835 | tmcA | APE_1835 | APE_1543 | Putative methyltransferase. | Conserved hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.641 |
| APE_2086 | APE_2486.1 | APE_2086 | APE_2486.1 | Conserved hypothetical protein. | tRNA (m1A) methyltransferase. | 0.768 |
| APE_2086 | rps8e | APE_2086 | APE_0789 | Conserved hypothetical protein. | 30S ribosomal protein S8e. | 0.477 |
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