Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_2136.1 | APE_2542.1 | APE_2136.1 | APE_2542.1 | TRAP transporter, solute-binding component. | TRAP transporter, membrane-spanning component. | 0.898 |
| APE_2542.1 | APE_2136.1 | APE_2542.1 | APE_2136.1 | TRAP transporter, membrane-spanning component. | TRAP transporter, solute-binding component. | 0.898 |
| APE_2542.1 | APE_2545.1 | APE_2542.1 | APE_2545.1 | TRAP transporter, membrane-spanning component. | TRAP transporter, solute-binding component. | 0.943 |
| APE_2542.1 | trpA | APE_2542.1 | APE_2550 | TRAP transporter, membrane-spanning component. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.408 |
| APE_2542.1 | trpB-2 | APE_2542.1 | APE_2548 | TRAP transporter, membrane-spanning component. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.408 |
| APE_2542.1 | trpC | APE_2542.1 | APE_2546 | TRAP transporter, membrane-spanning component. | Indole-3-glycerol phosphate synthase; IGPS; Belongs to the TrpC family. | 0.408 |
| APE_2542.1 | trpF | APE_2542.1 | APE_2547 | TRAP transporter, membrane-spanning component. | N-(5'-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family. | 0.408 |
| APE_2545.1 | APE_2542.1 | APE_2545.1 | APE_2542.1 | TRAP transporter, solute-binding component. | TRAP transporter, membrane-spanning component. | 0.943 |
| APE_2545.1 | trpA | APE_2545.1 | APE_2550 | TRAP transporter, solute-binding component. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.459 |
| APE_2545.1 | trpB-2 | APE_2545.1 | APE_2548 | TRAP transporter, solute-binding component. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.458 |
| APE_2545.1 | trpC | APE_2545.1 | APE_2546 | TRAP transporter, solute-binding component. | Indole-3-glycerol phosphate synthase; IGPS; Belongs to the TrpC family. | 0.462 |
| APE_2545.1 | trpF | APE_2545.1 | APE_2547 | TRAP transporter, solute-binding component. | N-(5'-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family. | 0.471 |
| trpA | APE_2542.1 | APE_2550 | APE_2542.1 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | TRAP transporter, membrane-spanning component. | 0.408 |
| trpA | APE_2545.1 | APE_2550 | APE_2545.1 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | TRAP transporter, solute-binding component. | 0.459 |
| trpA | trpB-2 | APE_2550 | APE_2548 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.994 |
| trpA | trpC | APE_2550 | APE_2546 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Indole-3-glycerol phosphate synthase; IGPS; Belongs to the TrpC family. | 0.999 |
| trpA | trpF | APE_2550 | APE_2547 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | N-(5'-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family. | 0.996 |
| trpB-2 | APE_2542.1 | APE_2548 | APE_2542.1 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | TRAP transporter, membrane-spanning component. | 0.408 |
| trpB-2 | APE_2545.1 | APE_2548 | APE_2545.1 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | TRAP transporter, solute-binding component. | 0.458 |
| trpB-2 | trpA | APE_2548 | APE_2550 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.994 |
page 1 of 2