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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspC-3Aspartate aminotransferase; Transaminase A. (397 aa)    
Predicted Functional Partners:
hom
Homoserine dehydrogenase; HDH.
 
 
 0.629
APE_2577.1
Conserved hypothetical protein.
 
     0.621
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
  
 0.571
lysC
Aspartate kinase; Belongs to the aspartokinase family.
 
 
 0.565
APE_0603
Molybdopterin converting factor; MoaD-MoaE fusion protein.
  
  
 0.539
dapA
Putative dihydrodipicolinate synthase.
 
  
 0.539
APE_2574
Hypothetical protein.
       0.511
asd
Aspartate-semialdehyde dehydrogenase; ASADH.
 
 
 0.487
APE_2507.1
Putative glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.487
fgs
Farnesylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.484
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.