Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BH0209 | ureD | gene:10726049 | gene:10726103 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.729 |
BH0209 | ureE | gene:10726049 | gene:10726100 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.733 |
BH0209 | ureF | gene:10726049 | gene:10726101 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.729 |
BH0209 | ureG | gene:10726049 | gene:10726102 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.733 |
BH0259 | ureA | gene:10726104 | gene:10726097 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease gamma subunit; BH0252; Belongs to the urease gamma subunit family. | 0.608 |
BH0259 | ureB | gene:10726104 | gene:10726098 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease beta subunit; BH0253; Belongs to the urease beta subunit family. | 0.637 |
BH0259 | ureC | gene:10726104 | gene:10726099 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease alpha subunit; BH0254; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.637 |
BH0259 | ureD | gene:10726104 | gene:10726103 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.773 |
BH0259 | ureE | gene:10726104 | gene:10726100 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.710 |
BH0259 | ureF | gene:10726104 | gene:10726101 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.697 |
BH0259 | ureG | gene:10726104 | gene:10726102 | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.778 |
BH1605 | ureD | gene:10727503 | gene:10726103 | Ferredoxin. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.729 |
BH1605 | ureE | gene:10727503 | gene:10726100 | Ferredoxin. | Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.733 |
BH1605 | ureF | gene:10727503 | gene:10726101 | Ferredoxin. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.729 |
BH1605 | ureG | gene:10727503 | gene:10726102 | Ferredoxin. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.733 |
BH2357 | ureD | gene:10728255 | gene:10726103 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.729 |
BH2357 | ureE | gene:10728255 | gene:10726100 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.733 |
BH2357 | ureF | gene:10728255 | gene:10726101 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.729 |
BH2357 | ureG | gene:10728255 | gene:10726102 | Ferredoxin [4Fe-4S]. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.733 |
ureA | BH0259 | gene:10726097 | gene:10726104 | Urease gamma subunit; BH0252; Belongs to the urease gamma subunit family. | BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family. | 0.608 |
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