STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureDUrease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (271 aa)    
Predicted Functional Partners:
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.999
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.998
ureE
Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.992
ureB
Urease beta subunit; BH0253; Belongs to the urease beta subunit family.
 
 
 0.988
ureA
Urease gamma subunit; BH0252; Belongs to the urease gamma subunit family.
 
 
 0.980
ureC
Urease alpha subunit; BH0254; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
  
 0.964
BH0259
BH0259; unknown conserved protein; Belongs to the bacterial solute-binding protein 9 family.
       0.773
BH0209
Ferredoxin [4Fe-4S].
      
 0.729
BH1605
Ferredoxin.
      
 0.729
BH2357
Ferredoxin [4Fe-4S].
      
 0.729
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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