STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BH0706D-mannonate dehydrolase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. (345 aa)    
Predicted Functional Partners:
BH0705
Uronate isomerase.
 
  
 0.984
BH0490
Altronate hydrolase.
 
 
 0.960
kduD
2-deoxy-D-gluconate 3-dehydrogenase; BH2167.
  
 
 0.914
BH0707
D-mannonate oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.902
BH1063
D-mannonate hydrolase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
  
  
 
0.902
BH0492
Altronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily.
 
 
 0.895
BH3767
Ribose 5-phosphate epimerase (pentose phosphate).
   
 
  0.821
BH2674
6-phosphogluconate dehydrogenase.
    
 0.813
rpe
Ribulose-phosphate 3-epimerase; BH2502; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
kdgK
2-keto-3-deoxygluconate kinase; BH3724; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.754
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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