STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araNL-arabinose transport system (sugar-binding protein); Part of the binding-protein-dependent transport system for L- arabinose; Belongs to the bacterial solute-binding protein 1 family. (445 aa)    
Predicted Functional Partners:
araP
L-arabinose transport system (permease); Part of the binding-protein-dependent transport system for L- arabinose. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.
 
 0.989
araQ
L-arabinose transport system (permease); Part of the binding-protein-dependent transport system for L- arabinose. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.
 
 0.978
abfA
alpha-L-arabinofuranosidase; Involved in the degradation of arabinan and is a key enzyme in the complete degradation of the plant cell wall. Catalyzes the cleavage of terminal alpha-(1->5)-arabinofuranosyl bonds in different hemicellulosic homopolysaccharides (branched and debranched arabinans) (By similarity).
 
  
 0.963
BH1140
Sugar ABC transportor (ATP-binding protein); Belongs to the ABC transporter superfamily.
  
 0.916
BH0904
BH0904; unknown conserved protein in bacilli.
 
    0.862
BH1862
L-arabinose utilization protein; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
  
 0.840
BH2724
Lactose transport system (permease).
 
   0.638
BH2725
Lactose transport system (permease).
 
 
 0.637
BH3680
Sugar ABC transporter (sugar-binding protein).
  
     0.630
msmE
Multiple sugar transport system (multiple sugar-binding protein); BH2226.
  
     0.619
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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