STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BH0913Carbohydrate deacetylase; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides. Belongs to the YdjC deacetylase family. (237 aa)    
Predicted Functional Partners:
BH0912
6-phospho-beta-glucosidase.
 
 
 0.920
BH0911
PTS system, cellobiose-specific enzyme II, C component (EIIA-cell); BH0911; incomplete.
 
   
 0.833
licH
6-phospho-beta-glucosidase; BH0183.
 
 
 0.830
BH3918
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.590
BH0910
PTS system, cellobiose-specific enzyme II, A component (EIIA-cell).
 
   
 0.583
BH3919
PTS system, cellobiose-specific enzyme II, C component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.563
BH3921
PTS system, cellobiose-specific enzyme II, B component.
 
   
 0.548
BH0909
PTS system, cellobiose-specific enzyme II, B component (EIIA-cell).
 
   
 0.541
gblH
Beta-glucosidase; BH0596; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.537
BH3920
PTS system, cellobiose-specific enzyme II, A component.
 
   
 0.470
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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