Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BH1362 | BH1363 | gene:10727256 | gene:10727257 | BH1362; unknown conserved protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.859 |
| BH1362 | BH1364 | gene:10727256 | gene:10727258 | BH1362; unknown conserved protein. | Diacylglycerol kinase. | 0.826 |
| BH1362 | bex | gene:10727256 | gene:10727261 | BH1362; unknown conserved protein. | GTP-binding protein (Era/ThdF family); An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.718 |
| BH1362 | cdd | gene:10727256 | gene:10727260 | BH1362; unknown conserved protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.718 |
| BH1362 | phoH | gene:10727256 | gene:10727255 | BH1362; unknown conserved protein. | Phosphate starvation-induced protein; BH1361. | 0.551 |
| BH1363 | BH1362 | gene:10727257 | gene:10727256 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | BH1362; unknown conserved protein. | 0.859 |
| BH1363 | BH1364 | gene:10727257 | gene:10727258 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Diacylglycerol kinase. | 0.952 |
| BH1363 | bex | gene:10727257 | gene:10727261 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | GTP-binding protein (Era/ThdF family); An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.989 |
| BH1363 | cdd | gene:10727257 | gene:10727260 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.979 |
| BH1363 | phoH | gene:10727257 | gene:10727255 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Phosphate starvation-induced protein; BH1361. | 0.954 |
| BH1363 | rplO | gene:10727257 | gene:10725993 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.837 |
| BH1363 | rplQ | gene:10727257 | gene:10726003 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 50S ribosomal protein L17; BH0163. | 0.904 |
| BH1363 | rplU | gene:10727257 | gene:10728921 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.863 |
| BH1363 | rplX | gene:10727257 | gene:10725985 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.870 |
| BH1363 | rpsQ | gene:10727257 | gene:10725983 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.887 |
| BH1364 | BH1362 | gene:10727258 | gene:10727256 | Diacylglycerol kinase. | BH1362; unknown conserved protein. | 0.826 |
| BH1364 | BH1363 | gene:10727258 | gene:10727257 | Diacylglycerol kinase. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.952 |
| BH1364 | bex | gene:10727258 | gene:10727261 | Diacylglycerol kinase. | GTP-binding protein (Era/ThdF family); An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.838 |
| BH1364 | cdd | gene:10727258 | gene:10727260 | Diacylglycerol kinase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.730 |
| BH1364 | phoH | gene:10727258 | gene:10727255 | Diacylglycerol kinase. | Phosphate starvation-induced protein; BH1361. | 0.616 |
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