STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BH2105Xylanase Y; Hydrolyzes xylooligosaccharides with a degree of polymerization of greater than or equal to 3, releasing xylose from the reducing end. Only hydrolyzes the beta anomers of xylooligosaccharides, with inversion of anomeric configuration. Hydrolyzes the glucose and xylose-based trisaccharides where xylose is located at the -1 subsite, GXX, XXG and GXG. Does not hydrolyze xylan, chitosan, lichenan, curdlan or carboxymethylcellulose. (388 aa)    
Predicted Functional Partners:
BH1061
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.925
xynB
Xylan beta-1,4-xylosidase; BH3683; Belongs to the glycosyl hydrolase 43 family.
  
 0.830
BH2120
Alkaline xylanase A (1,4-beta-D-xylan xylanohydrolase); Belongs to the glycosyl hydrolase 10 (cellulase F) family.
 
   
 0.781
BH2111
BH2111; unknown conserved protein.
 
    0.768
BH1913
BH1913; unknown conserved protein in bacilli.
 
    0.711
BH0842
BH0842; unknown conserved protein.
     
 0.622
BH2023
Arabinogalactan endo-beta-1,4-galactanase; BH2023; unknown.
  
     0.616
BH2109
BH2109; unknown conserved protein.
  
     0.573
hisF
Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity).
      
 0.562
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; BH3579.
      
 0.561
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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