Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BH0418 | BH1758 | gene:10726271 | gene:10727656 | BH0418; unknown conserved protein in others. | BH1758; unknown. | 0.568 |
BH0418 | BH2644 | gene:10726271 | gene:10728542 | BH0418; unknown conserved protein in others. | BH2644; unknown conserved protein in B. subtilis. | 0.430 |
BH1405 | BH2644 | gene:10727299 | gene:10728542 | BH1405; unknown conserved protein in B. subtilis. | BH2644; unknown conserved protein in B. subtilis. | 0.493 |
BH1758 | BH0418 | gene:10727656 | gene:10726271 | BH1758; unknown. | BH0418; unknown conserved protein in others. | 0.568 |
BH1758 | BH2644 | gene:10727656 | gene:10728542 | BH1758; unknown. | BH2644; unknown conserved protein in B. subtilis. | 0.433 |
BH2643 | BH2644 | gene:10728541 | gene:10728542 | BH2643; unknown. | BH2644; unknown conserved protein in B. subtilis. | 0.479 |
BH2644 | BH0418 | gene:10728542 | gene:10726271 | BH2644; unknown conserved protein in B. subtilis. | BH0418; unknown conserved protein in others. | 0.430 |
BH2644 | BH1405 | gene:10728542 | gene:10727299 | BH2644; unknown conserved protein in B. subtilis. | BH1405; unknown conserved protein in B. subtilis. | 0.493 |
BH2644 | BH1758 | gene:10728542 | gene:10727656 | BH2644; unknown conserved protein in B. subtilis. | BH1758; unknown. | 0.433 |
BH2644 | BH2643 | gene:10728542 | gene:10728541 | BH2644; unknown conserved protein in B. subtilis. | BH2643; unknown. | 0.479 |
BH2644 | opuD | gene:10728542 | gene:10728543 | BH2644; unknown conserved protein in B. subtilis. | Glycine betaine transporter; BH2645; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.628 |
opuD | BH2644 | gene:10728543 | gene:10728542 | Glycine betaine transporter; BH2645; Belongs to the BCCT transporter (TC 2.A.15) family. | BH2644; unknown conserved protein in B. subtilis. | 0.628 |