STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comGCExogenous DNA-binding protein; Required for transformation and DNA binding. (102 aa)    
Predicted Functional Partners:
comGB
DNA transport machinery; Required for transformation and DNA binding; Belongs to the GSP F family.
 
  
 0.984
comGA
Late competence protein; Required for uptake of DNA by competent cells; Belongs to the GSP E family.
 
  
 0.969
comGD
DNA transport machinery; BH2824.
  
  
 0.959
BH2826
BH2826; unknown.
  
  
 0.940
BH2825
BH2825; unknown.
  
  
 0.933
comC
Late competence protein required for processing and translocation; BH3035; Belongs to the peptidase A24 family.
  
  
 0.903
comFA
Late competence protein; BH3626.
 
  
 0.812
BH2822
BH2822; unknown conserved protein in B. subtilis.
  
    0.793
comEC
Late competence operon required for DNA binding and uptake; BH1335.
  
  
 0.767
BH2823
BH2823; unknown.
       0.762
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.