Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BH0399 | BH3061 | gene:10726252 | gene:10728971 | Malate oxidoreductase (NAD) (malic enzyme). | Acetolactate synthase large subunit; BH3061; incomplete. | 0.851 |
BH0399 | ilvN | gene:10726252 | gene:10728970 | Malate oxidoreductase (NAD) (malic enzyme). | Acetolactate synthase small subunit; BH3060. | 0.829 |
BH0399 | leuA | gene:10726252 | gene:10728968 | Malate oxidoreductase (NAD) (malic enzyme). | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.831 |
BH0399 | leuC | gene:10726252 | gene:10728966 | Malate oxidoreductase (NAD) (malic enzyme). | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.811 |
BH0399 | leuD | gene:10726252 | gene:10728965 | Malate oxidoreductase (NAD) (malic enzyme). | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.834 |
BH0399 | pykA | gene:10726252 | gene:10729075 | Malate oxidoreductase (NAD) (malic enzyme). | Pyruvate kinase; BH3163; Belongs to the pyruvate kinase family. | 0.962 |
BH1070 | BH3061 | gene:10726964 | gene:10728971 | Tartrate dehydrogenase. | Acetolactate synthase large subunit; BH3061; incomplete. | 0.963 |
BH1070 | ilvC | gene:10726964 | gene:10728969 | Tartrate dehydrogenase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.850 |
BH1070 | ilvD | gene:10726964 | gene:10728972 | Tartrate dehydrogenase. | Dihydroxy-acid dehydratase; BH3062; Belongs to the IlvD/Edd family. | 0.874 |
BH1070 | ilvN | gene:10726964 | gene:10728970 | Tartrate dehydrogenase. | Acetolactate synthase small subunit; BH3060. | 0.980 |
BH1070 | leuA | gene:10726964 | gene:10728968 | Tartrate dehydrogenase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.873 |
BH1070 | leuC | gene:10726964 | gene:10728966 | Tartrate dehydrogenase. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.936 |
BH1070 | leuD | gene:10726964 | gene:10728965 | Tartrate dehydrogenase. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.906 |
BH3061 | BH0399 | gene:10728971 | gene:10726252 | Acetolactate synthase large subunit; BH3061; incomplete. | Malate oxidoreductase (NAD) (malic enzyme). | 0.851 |
BH3061 | BH1070 | gene:10728971 | gene:10726964 | Acetolactate synthase large subunit; BH3061; incomplete. | Tartrate dehydrogenase. | 0.963 |
BH3061 | ilvC | gene:10728971 | gene:10728969 | Acetolactate synthase large subunit; BH3061; incomplete. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.995 |
BH3061 | ilvD | gene:10728971 | gene:10728972 | Acetolactate synthase large subunit; BH3061; incomplete. | Dihydroxy-acid dehydratase; BH3062; Belongs to the IlvD/Edd family. | 0.984 |
BH3061 | ilvN | gene:10728971 | gene:10728970 | Acetolactate synthase large subunit; BH3061; incomplete. | Acetolactate synthase small subunit; BH3060. | 0.999 |
BH3061 | leuA | gene:10728971 | gene:10728968 | Acetolactate synthase large subunit; BH3061; incomplete. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.981 |
BH3061 | leuB | gene:10728971 | gene:10728967 | Acetolactate synthase large subunit; BH3061; incomplete. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily. | 0.983 |
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