node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BH0128 | BH3553 | gene:10725968 | gene:10729466 | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.554 |
BH0128 | rph | gene:10725968 | gene:10728980 | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.671 |
BH0128 | rpsD | gene:10725968 | gene:10729121 | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.972 |
BH0128 | rpsE | gene:10725968 | gene:10725991 | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.973 |
BH0128 | rpsK | gene:10725968 | gene:10726001 | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.973 |
BH0128 | ypfD | gene:10725968 | gene:10727534 | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | 30S ribosomal protein S1; BH1636. | 0.786 |
BH1160 | BH3066 | gene:10727054 | gene:10728978 | Non-canonical purine NTP pyrophosphatase homolog; BH1160; unknown conserved protein; Belongs to the HAM1 NTPase family. | Phosphoesterase; BH3066; unknown conserved protein. | 0.621 |
BH1160 | rph | gene:10727054 | gene:10728980 | Non-canonical purine NTP pyrophosphatase homolog; BH1160; unknown conserved protein; Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.711 |
BH3066 | BH1160 | gene:10728978 | gene:10727054 | Phosphoesterase; BH3066; unknown conserved protein. | Non-canonical purine NTP pyrophosphatase homolog; BH1160; unknown conserved protein; Belongs to the HAM1 NTPase family. | 0.621 |
BH3066 | BH3067 | gene:10728978 | gene:10728979 | Phosphoesterase; BH3066; unknown conserved protein. | dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.976 |
BH3066 | rph | gene:10728978 | gene:10728980 | Phosphoesterase; BH3066; unknown conserved protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.762 |
BH3067 | BH3066 | gene:10728979 | gene:10728978 | dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Phosphoesterase; BH3066; unknown conserved protein. | 0.976 |
BH3067 | rph | gene:10728979 | gene:10728980 | dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.989 |
BH3553 | BH0128 | gene:10729466 | gene:10725968 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.554 |
BH3553 | rph | gene:10729466 | gene:10728980 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.988 |
BH3553 | ypfD | gene:10729466 | gene:10727534 | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 30S ribosomal protein S1; BH1636. | 0.642 |
dnaG | rph | gene:10727269 | gene:10728980 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.837 |
rph | BH0128 | gene:10728980 | gene:10725968 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Ribosomal protein L7AE family; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.671 |
rph | BH1160 | gene:10728980 | gene:10727054 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Non-canonical purine NTP pyrophosphatase homolog; BH1160; unknown conserved protein; Belongs to the HAM1 NTPase family. | 0.711 |
rph | BH3066 | gene:10728980 | gene:10728978 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Phosphoesterase; BH3066; unknown conserved protein. | 0.762 |