Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BH1469 | BH3194 | gene:10727367 | gene:10729106 | BH1469; unknown conserved protein. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.593 |
BH1563 | BH2665 | gene:10727461 | gene:10728563 | Superoxide dismutase. | 2-cys peroxiredoxin. | 0.528 |
BH1563 | BH3194 | gene:10727461 | gene:10729106 | Superoxide dismutase. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.706 |
BH1563 | katB | gene:10727461 | gene:10727878 | Superoxide dismutase. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.528 |
BH2665 | BH1563 | gene:10728563 | gene:10727461 | 2-cys peroxiredoxin. | Superoxide dismutase. | 0.528 |
BH2665 | BH3025 | gene:10728563 | gene:10728935 | 2-cys peroxiredoxin. | General stress protein. | 0.456 |
BH2665 | BH3194 | gene:10728563 | gene:10729106 | 2-cys peroxiredoxin. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.564 |
BH2665 | katB | gene:10728563 | gene:10727878 | 2-cys peroxiredoxin. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.945 |
BH2665 | sodA | gene:10728563 | gene:10727307 | 2-cys peroxiredoxin. | Superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | 0.528 |
BH2665 | trxA | gene:10728563 | gene:10729010 | 2-cys peroxiredoxin. | Thioredoxin; BH3098; Belongs to the thioredoxin family. | 0.603 |
BH3025 | BH2665 | gene:10728935 | gene:10728563 | General stress protein. | 2-cys peroxiredoxin. | 0.456 |
BH3025 | BH3194 | gene:10728935 | gene:10729106 | General stress protein. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.781 |
BH3025 | katB | gene:10728935 | gene:10727878 | General stress protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.538 |
BH3193 | BH3194 | gene:10729105 | gene:10729106 | BH3193; unknown conserved protein in B. subtilis. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.617 |
BH3194 | BH1469 | gene:10729106 | gene:10727367 | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | BH1469; unknown conserved protein. | 0.593 |
BH3194 | BH1563 | gene:10729106 | gene:10727461 | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | Superoxide dismutase. | 0.706 |
BH3194 | BH2665 | gene:10729106 | gene:10728563 | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 2-cys peroxiredoxin. | 0.564 |
BH3194 | BH3025 | gene:10729106 | gene:10728935 | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | General stress protein. | 0.781 |
BH3194 | BH3193 | gene:10729106 | gene:10729105 | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | BH3193; unknown conserved protein in B. subtilis. | 0.617 |
BH3194 | arsC | gene:10729106 | gene:10728908 | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. | 0.637 |
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