STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsRTranscriptional repressor of the ribose operon; Transcriptional repressor for the ribose rbsDACBK operon. (331 aa)    
Predicted Functional Partners:
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.974
rbsB
Ribose ABC transporter (ribose-binding protein); BH3732.
 
  
0.934
rbsC
Ribose ABC transporter (permease); BH3731; Belongs to the binding-protein-dependent transport system permease family.
  
 0.921
rbsA
Ribose ABC transporter (ATP-binding protein); Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.910
rbsD
Ribose ABC transporter (permease); Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.853
gltA
Glutamate synthase (large subunit); BH1728.
    
   0.726
BH3901
Rhizopine ABC transporter (rhizopine-binding protein).
 
  
 0.719
BH2323
Sugar ABC transporter (sugar-binding protein).
 
  
 0.711
BH2321
Sugar ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.672
BH2322
Sugar ABC transporter (ATP-binding protein); Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family.
  
  
 0.668
Your Current Organism:
Bacillus halodurans
NCBI taxonomy Id: 272558
Other names: B. halodurans C-125, Bacillus halodurans C-125, Bacillus halodurans str. C-125, Bacillus halodurans strain C-125
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