Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BPSL2000Similar to Ralstonia solanacearum putative amino acid transmembrane transmembrane protein rsc1751 or rs02939 SWALL:Q8XYK7 (EMBL:AL646066) (315 aa) fasta scores: E(): 1.4e-58, 58.59% id in 314 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport system permease protein bmeii0068 SWALL:Q8YDV6 (EMBL:AE009645) (332 aa) fasta scores: E(): 9e-42, 44.79% id in 317 aa. (311 aa)    
Predicted Functional Partners:
BPSL1999
N-terminal region similar to Ralstonia solanacearum probable amino acid transport system permease lipoprotein transmembrane rsc1752 or rs02940 SWALL:Q8XYK6 (EMBL:AL646066) (440 aa) fasta scores: E(): 1.9e-34, 46.79% id in 421 aa, and C-terminal region similar to Ralstonia solanacearum probable amino-acid ATP-binding ABC transporter protein rsc1753 or rs02941 SWALL:Q8XYK5 (EMBL:AL646066) (266 aa) fasta scores: E(): 8.2e-34, 53.57% id in 252 aa, and to Escherichia coli, and Escherichia coli O157:H7 high-affinity branched-chain amino acid transport ATP-binding protein LivG or b3455 or z48 [...]
 
 
 0.998
BPSL3414
Putative branched-chain amino acid ABC transporter integral membrane subunit; Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein Rsc3340 or Rs02575 SWALL:Q8XU53 (EMBL:AL646074) (328 aa) fasta scores: E(): 1.5e-83, 71.6% id in 317 aa; Belongs to the binding-protein-dependent transport system permease family.
  
 0.983
BPSL1998
Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 2.1e-19, 36.36% id in 220 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport ATP-binding protein bmeii0065 SWALL:Q8YDV9 (EMBL:AE009645) (238 aa) fasta scores: E(): 3.4e-28, 45.29% id in 234 aa.
 
  
 0.975
BPSL0048
Putative membrane protein; Similar to Aeropyrum pernix hypothetical high-affinity branched-chain amino acid transport permease protein APE1304 SWALL:Q9YCF3 (EMBL:AP000061) (349 aa) fasta scores: E(): 1.8e-10, 26.99% id in 326 aa. C-terminal region is similar to the N-terminal region of Brucella melitensis high-affinity branched-chain amino acid transport system permease protein LivM / high-affinity branched-chain amino acid transport ATP-binding protein LivG bmeii0120 SWALL:Q8YDQ5 (EMBL:AE009650) (515 aa) fasta scores: E(): 2.8e-13, 34.29% id in 277 aa.
 
  
 0.960
BPSL3410
Similar to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein Rsp0706 or Rs01743 SWALL:Q8XRX5 (EMBL:AL646080) (608 aa) fasta scores: E(): 2.1e-134, 73.89% id in 586 aa; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.923
BPSL3418
Similar to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein Rsc2438 or Rs02664 SWALL:Q8XWN5 (EMBL:AL646070) (257 aa) fasta scores: E(): 1e-25, 37.3% id in 252 aa, and to Salmonella typhimurium high-affinity branched-chain amino acid transport ATP-binding protein LivG or stm3561 or Sty4251 SWALL:LIVG_SALTY (SWALL:P30293) (255 aa) fasta scores: E(): 1.9e-24, 39.23% id in 260 aa.
 
  
 0.866
BPSL0921
Putative transport system permease protein; Similar to the C-terminal region of Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease protein BraE or pa1072 SWALL:BRAE_PSEAE (SWALL:P21628) (417 aa) fasta scores: E(): 3.3e-41, 44.56% id in 359 aa. Full length CDS is similar to and to Ralstonia solanacearum probable amino-acid transmembrane ABC transporter protein rsc2439 or rs02663 SWALL:Q8XWN4 (EMBL:AL646070) (378 aa) fasta scores: E(): 1.2e-100, 68.08% id in 376 aa.
 
  
 0.863
braE
Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease protein BraE SWALL:BRAE_PSEAE (SWALL:P21628) (417 aa) fasta scores: E(): 4.1e-91, 62.91% id in 418 aa, and to Escherichia coli high-affinity branched-chain amino acid transport system permease protein LivM SWALL:LIVM_ECOLI (SWALL:P22729) (425 aa) fasta scores: E(): 3e-90, 59.31% id in 408 aa.
  
 0.862
BPSL0922
Similar to Streptococcus pneumoniae R6 ABC transporter ATP-binding protein-branched chain amino acid transport LivG SWALL:AAK99466 (EMBL:AE008443) (254 aa) fasta scores: E(): 8.6e-36, 50.4% id in 248 aa, and to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein rsc2438 or rs02664 SWALL:Q8XWN5 (EMBL:AL646070) (257 aa) fasta scores: E(): 1.4e-64, 81.71% id in 257 aa, and to Ralstonia solanacearum probable amino-acid ATP-binding ABC transporter protein rsp0016 or rs01988 SWALL:Q8XTT8 (EMBL:AL646076) (265 aa) fasta scores: E(): 2.6e-40, 54.25% id in 247 aa; Poss [...]
 
  
 0.859
braF
Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraF SWALL:BRAF_PSEAE (SWALL:P21629) (255 aa) fasta scores: E(): 1.4e-54, 64% id in 250 aa, and to Escherichia coli and Shigella flexneri high-affinity branched-chain amino acid transport ATP-binding protein LivG or SF3473 SWALL:LIVG_ECOLI (SWALL:P22730) (255 aa) fasta scores: E(): 5.3e-51, 59.2% id in 250 aa. Similar to BPSL0922, 50.000% identity (50.202% ungapped) in 248 aa overlap.
 
  
 0.853
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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