Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
BPSL2016Hypothetical protein; No significant database matches. (236 aa)    
Predicted Functional Partners:
BPSL1754
Putative lipoprotein; Similar to Bacillus subtilis YngK SWALL:Q9R9I7 (EMBL:AF184956) (510 aa) fasta scores: E(): 3.3e-96, 50.4% id in 494 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical lipoprotein YddW precursor or b1491 or z2217 or ecs2096 SWALL:YDDW_ECOLI (SWALL:P76130) (439 aa) fasta scores: E(): 5.7e-43, 37.64% id in 433 aa.
  
     0.465
BPSL0680
Putative membrane protein; Similar to Deinococcus radiodurans hypothetical protein Dr2437 SWALL:Q9RRQ1 (EMBL:AE002073) (278 aa) fasta scores: E(): 3.9e-10, 29.85% id in 278 aa, and to Streptomyces coelicolor putative integral membrane protein sco1313 or scbac36f5.24 SWALL:Q93IV7 (EMBL:AL592292) (285 aa) fasta scores: E(): 1.3e-07, 27.91% id in 283 aa.
  
     0.417
BPSL2015
Putative membrane attached glycosyl hydrolase; Similar to Alteromonas sp. beta-hexosaminidase A precursor Cht60 SWALL:HEXA_ALTSO (SWALL:P48823) (598 aa) fasta scores: E(): 2.1e-59, 35.98% id in 628 aa, and to Ralstonia solanacearum putative hydrolase glycosidase protein rsc0769 or rs05085 SWALL:Q8Y1C1 (EMBL:AL646060) (734 aa) fasta scores: E(): 3.1e-152, 61.84% id in 684 aa; Belongs to the glycosyl hydrolase 3 family.
       0.400
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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