STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2110Similar to Ralstonia solanacearum hypothetical protein rsp1175 or rs05065 SWALL:Q8XQP6 (EMBL:AL646083) (83 aa) fasta scores: E(): 1.2e-14, 58.82% id in 68 aa, and to Pseudomonas aeruginosa hypothetical protein pa0038 SWALL:Q9I794 (EMBL:AE004443) (71 aa) fasta scores: E(): 5.2e-14, 60.29% id in 68 aa. (69 aa)    
Predicted Functional Partners:
BPSL2749
Putative membrane protein; Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc0753 or rs05100 SWALL:Q8Y1D7 (EMBL:AL646060) (108 aa) fasta scores: E(): 1e-21, 70.1% id in 97 aa and Pseudomonas aeruginosa hypothetical protein Pa3040 pa3040 SWALL:Q9HZG8 (EMBL:AE004729) (109 aa) fasta scores: E(): 1.6e-09, 43.43% id in 99 aa.
  
    0.568
BPSL2109
Putative glyoxylate-realted oxidoreductase; Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 or b0509 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 2.7e-23, 34.7% id in 291 aa, and to Ralstonia solanacearum probable oxidoreductase protein rsc2429 or rs02679 SWALL:Q8XWP4 (EMBL:AL646070) (298 aa) fasta scores: E(): 3.1e-23, 33.21% id in 292 aa.
  
    0.547
BPSL1547
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0773 or rs05081 SWALL:Q8Y1B7 (EMBL:AL646061) (740 aa) fasta scores: E(): 3e-79, 44.84% id in 814 aa, and to Yersinia pestis putative exported protein ypo3987 SWALL:Q8ZA33 (EMBL:AJ414160) (740 aa) fasta scores: E(): 2.1e-69, 39.63% id in 820 aa. Note: It contains a region from approx. residue 200 to approx. residue 350 with very little or no similarities to database entries.
  
    0.546
BPSS2217
Similar to Rhizobium loti hypothetical protein msr0042 SWALL:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 5.3e-11, 68.85% id in 61 aa, and to Brucella melitensis hypothetical cytosolic protein bmei1136 SWALL:Q8YGM2 (EMBL:AE009553) (65 aa) fasta scores: E(): 2.7e-10, 68.33% id in 60 aa.
   
    0.539
BPSL1445
Putative lipoprotein; Similar to Ralstonia solanacearum putative lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 1.8e-34, 54.54% id in 198 aa, and to Xanthomonas axonopodis hypothetical protein xac4219 SWALL:AAM39054 (EMBL:AE012074) (301 aa) fasta scores: E(): 6.1e-06, 32.3% id in 130 aa.
  
    0.511
BPSS1847
Putative lipoprotein; Similar to Ralstonia solanacearum putative lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 2.6e-34, 56.47% id in 193 aa, and to Xylella fastidiosa hypothetical protein xf0565 SWALL:Q9PFU2 (EMBL:AE003903) (301 aa) fasta scores: E(): 1.5e-06, 30.38% id in 181 aa.
  
    0.509
bfr
Bacterioferritin; Iron-storage protein.
  
    0.402
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.