Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2139Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc1422 or rs05270 SWALL:Q8XZH3 (EMBL:AL646064) (142 aa) fasta scores: E(): 9.8e-20, 47.88% id in 142 aa, and low similarity to Neisseria meningitidis putative membrane protein nma1383 SWALL:Q9JUC5 (EMBL:AL162755) (135 aa) fasta scores: E(): 0.00044, 32.37% id in 139 aa. (144 aa)    
Predicted Functional Partners:
cobS
Putative cobalamin [5'-phosphate] synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.844
BPSL2138
Putative membrane protein; Similar to Ralstonia solanacearum putative transmembrane protein rsc1423 or rs05269 SWALL:Q8XZH2 (EMBL:AL646064) (308 aa) fasta scores: E(): 1.4e-87, 84% id in 300 aa, and to Neisseria meningitidis putative periplasmic protein nma1382 or gna1220 SWALL:Q9JR80 (EMBL:AL162755) (315 aa) fasta scores: E(): 4.6e-54, 65.58% id in 308 aa.
 
 
 0.836
BPSL0993
Similar to Ralstonia solanacearum hypothetical protein rsc2385 or rs02765 SWALL:Q8XWT5 (EMBL:AL646069) (62 aa) fasta scores: E(): 3.3e-11, 64.28% id in 56 aa, and to Neisseria meningitidis hypothetical protein nma1654 SWALL:Q9JTS3 (EMBL:AL162756) (61 aa) fasta scores: E(): 3.1e-06, 45.76% id in 59 aa.
  
     0.754
BPSL2513
Putative membrane protein; No significant database matches.
  
     0.729
BPSL1490
Putative membrane protein; Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 5e-135, 52.92% id in 582 aa, and to Neisseria meningitidis putative inner membrane protein nma0497 SWALL:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.1e-23, 26.95% id in 575 aa.
  
     0.727
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.674
BPSL3145
Conserved hypothetical protein; Similar to Ralstonia solanacearum putative signal peptide protein Rsc2957 or Rs01343 SWALL:Q8XV74 (EMBL:AL646072) (115 aa) fasta scores: E(): 3.2e-09, 50.6% id in 83 aa, and to Pseudomonas putida toluene tolerance protein Ttg2E SWALL:Q9Z3Z8 (EMBL:AF106002) (100 aa) fasta scores: E(): 0.13, 31.25% id in 80 aa.
  
     0.671
BPSL2630
Putative lipoprotein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0709 or rs05144 SWALL:Q8Y1I1 (EMBL:AL646060) (362 aa) fasta scores: E(): 7.5e-43, 48.54% id in 344 aa.
  
    0.648
BPSL3313
HNS-like transcriptional regulator; Similar to Ralstonia solanacearum putative HNS-like transcription regulator protein Rsp0335 or Rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 6.6e-15, 53.6% id in 97 aa, and to Escherichia coli Ler Lee-encoded regulator SWALL:Q9AJ33 (EMBL:AF200363) (129 aa) fasta scores: E(): 1.5e-05, 33.66% id in 101 aa, and to Bordetella pertussis Bph3 HNS protein SWALL:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 0.0053, 36.03% id in 111 aa.
  
     0.642
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
       0.638
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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