STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL3104Similar to Ralstonia solanacearum hypothetical protein Rsp0746 or Rs01962 SWALL:Q8XRT5 (EMBL:AL646080) (157 aa) fasta scores: E(): 1.4e-42, 71.79% id in 156 aa. (170 aa)    
Predicted Functional Partners:
BPSL3105
Similar to Ralstonia solanacearum hypothetical protein Rsp0745 or Rs01963 SWALL:Q8XRT6 (EMBL:AL646080) (167 aa) fasta scores: E(): 3.7e-49, 72.45% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2367 SWALL:Q9I1B2 (EMBL:AE004663) (165 aa) fasta scores: E(): 1.1e-11, 32.91% id in 158 aa.
 
  
 0.943
BPSL3102
Similar to Ralstonia solanacearum hypothetical protein Rsp0748 or Rs01960 SWALL:Q8XRT3 (EMBL:AL646080) (363 aa) fasta scores: E(): 4.5e-83, 57.33% id in 368 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.6e-17, 30.07% id in 256 aa.
 
  
 0.924
BPSL3107
Similar to Ralstonia solanacearum hypothetical protein Rsp0743 or Rs01965 SWALL:Q8XRT8 (EMBL:AL646080) (170 aa) fasta scores: E(): 4.6e-47, 79.16% id in 168 aa.
 
  
 0.922
BPSL3106
Similar to Ralstonia solanacearum hypothetical protein Rsp0744 or Rs01964 SWALL:Q8XRT7 (EMBL:AL646080) (496 aa) fasta scores: E(): 9.4e-175, 86.26% id in 495 aa, and to Rhizobium leguminosarum ImpC SWALL:Q93ED1 (EMBL:AF361470) (493 aa) fasta scores: E(): 3.2e-102, 51.41% id in 496 aa.
 
  
 0.917
BPSL3103
Similar to Ralstonia solanacearum hypothetical protein Rsp0747 or Rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 1.2e-156, 60.72% id in 611 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 6e-31, 30.15% id in 630 aa.
 
  
 0.915
BPSL3100
Similar to Ralstonia solanacearum hypothetical protein Rsp0759 or Rs01949 SWALL:Q8XRS2 (EMBL:AL646080) (337 aa) fasta scores: E(): 1.5e-44, 52.82% id in 354 aa, and to Rhizobium leguminosarum ImpA SWALL:Q93ED3 (EMBL:AF361470) (358 aa) fasta scores: E(): 7.1e-06, 27.1% id in 380 aa.
 
  
 0.903
BPSL3111
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein Rsp0739 or Rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 2.7e-70, 64.98% id in 257 aa.
 
  
 0.872
BPSL3110
Similar to Ralstonia solanacearum hypothetical protein Rsp0740 or Rs01968 SWALL:Q8XRU1 (EMBL:AL646080) (448 aa) fasta scores: E(): 3.8e-135, 73.66% id in 448 aa, and to Rhizobium leguminosarum ImpJ SWALL:Q93EC4 (EMBL:AF361470) (446 aa) fasta scores: E(): 8.8e-32, 29.13% id in 460 aa.
 
  
 0.870
BPSL3109
Putative lipoprotein; Similar to Ralstonia solanacearum putative transmembrane protein Rsp0741 or Rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 3.9e-40, 59.16% id in 191 aa.
 
  
 0.869
BPSL2041
Conserved hypothetical protein; Similar to Salmonella enterica subsp. enterica serovar Typhimurium VrgS protein SWALL:Q93IR3 (EMBL:AJ320483) (729 aa) fasta scores: E(): 1.8e-11, 26.08% id in 552 aa, and to Ralstonia solanacearum putative VGR-related protein rsp0750 or rs01958 SWALL:Q8XRT1 (EMBL:AL646080) (918 aa) fasta scores: E(): 1.4e-57, 40.27% id in 961 aa. Note: Also similar to BPSL2050 (933 aa) fasta scores: E(): 3.5e-32, 30.665% identity in 962 aa overlap.
 
  
 0.824
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.