STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL3277Similar to Yersinia pestis metallo-beta-lactamase superfamily protein Ypo1409 SWALL:Q8ZG96 (EMBL:AJ414148) (215 aa) fasta scores: E(): 6.4e-53, 59.15% id in 213 aa. (214 aa)    
Predicted Functional Partners:
gloB
Putative gultathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
 0.924
gloA
Lactoylglutathione lyase; Similar to Neisseria meningitidis lactoylglutathione lyase GloA SWALL:LGUL_NEIMA (SWALL:O33393) (138 aa) fasta scores: E(): 1.4e-39, 75% id in 128 aa, and to Pseudomonas aeruginosa lactoylglutathione lyase PA3524 SWALL:Q9HY85 (EMBL:AE004773) (128 aa) fasta scores: E(): 6.3e-38, 71.87% id in 128 aa.
  
  
 0.919
ldhA
Similar to Escherichia coli D-lactate dehydrogenase LdhA or HslI or HtpH or b1380 SWALL:LDHD_ECOLI (SWALL:P52643) (329 aa) fasta scores: E(): 3.3e-60, 51.81% id in 330 aa and to Pseudomonas aeruginosa D-lactate dehydrogenase LdhA or pa0927 SWALL:Q9I530 (EMBL:AE004527) (329 aa) fasta scores: E(): 2.8e-86, 70.6% id in 330 aa; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.908
BPSL2842
Putative FAD-binding oxidase; Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 1.3e-37, 32.22% id in 419 aa, and to the C-terminal region of Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor Dld1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-60, 43.34% id in 436 aa.
    
 0.901
BPSS1318
Similar to Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor DlD1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-53, 37.01% id in 489 aa, and to Ralstonia solanacearum putative D-lactate dehydrogenase Dld or rsc2664 or rs04542 SWALL:Q8XW11 (EMBL:AL646071) (472 aa) fasta scores: E(): 1.1e-101, 58.98% id in 451 aa, and to Rhizobium loti probable D-lactate dehydrogenase mll1488 SWALL:Q98KG4 (EMBL:AP002997) (575 aa) fasta scores: E(): 2.4e-99, 56.4% id in 445 aa. Possible alternative translational start.
    
 0.901
BPSL3278
Conserved hypothetical protein; Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc3269 or Rs02498 SWALL:Q8XUC2 (EMBL:AL646074) (226 aa) fasta scores: E(): 1.5e-62, 73.73% id in 198 aa.
     
 0.814
BPSL2101
Subfamily M20A unassigned peptidase; Similar to Escherichia coli acetylornithine deacetylase ArgE or b3957 SWALL:ARGE_ECOLI (SWALL:P23908) (383 aa) fasta scores: E(): 7.7e-24, 32.87% id in 365 aa, and to Ralstonia solanacearum probable acetylornithine deacetylase rsc1641 or rs04016 SWALL:Q8XYW5 (EMBL:AL646065) (397 aa) fasta scores: E(): 3.3e-107, 67.18% id in 384 aa.
     
 0.680
BPSL3279
Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 4.7e-22, 45.16% id in 155 aa, and to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.3e-19, 40.66% id in 150 aa.
       0.609
BPSL0728
Similar to Burkholderia cepacia glucose dehydrogenase gdhalphA SWALL:AAN39686 (EMBL:AF430844) (539 aa) fasta scores: E(): 5.8e-30, 29.76% id in 541 aa, and to Xanthomonas axonopodis 2-keto-gluconate dehydrogenase xac2128 SWALL:Q8PKP1 (EMBL:AE011848) (508 aa) fasta scores: E(): 5.4e-62, 41.53% id in 520 aa, and to Halobacterium sp. Vng1035C vng1035C SWALL:Q9HQR8 (EMBL:AE005037) (529 aa) fasta scores: E(): 2.8e-44, 35.97% id in 531 aa.
      
 0.579
BPSS0976
Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgB SWALL:Q9XCR0 (EMBL:AF131202) (553 aa) fasta scores: E(): 1.5e-89, 45.23% id in 535 aa, and to Ralstonia solanacearum putative transmembrane dehydrogenase rsc0771 or rs05083 SWALL:Q8Y1B9 (EMBL:AL646061) (539 aa) fasta scores: E(): 4.7e-179, 83.48% id in 539 aa.
      
 0.579
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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