STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL3352Hypothetical protein; No significant database matches. (100 aa)    
Predicted Functional Partners:
BPSL3351
Putative bacteriophage coat protein; Similar to Xylella fastidiosa hypothetical protein Xf1878 SWALL:Q9PCA3 (EMBL:AE004008) (73 aa) fasta scores: E(): 0.25, 32.25% id in 62 aa, and to Bacteriophage Pf3 major coat protein SWALL:COAT_BPPF3 (SWALL:P03623) (44 aa) fasta scores: E(): 5.9, 32.43% id in 37 aa.
       0.551
BPSL3350
Putative membrane protein; No significant database matches.
       0.415
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.