STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS0606LysR family regulatory protein; Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.3e-25, 30.16% id in 295 aa, and to Pseudomonas fluorescens positive transcriptional regulator PhnR SWALL:O69758 (EMBL:L49465) (299 aa) fasta scores: E(): 1.2e-48, 47.6% id in 292 aa; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
BPSS0166
LysR family regulatory protein; Similar to Pseudomonas aeruginosa transcriptional regulator for exotoxin A production PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 1.3e-42, 42.06% id in 290 aa, and to Salmonella typhi possible LysR-family transcriptional regulator sty3037 SWALL:Q8Z482 (EMBL:AL627276) (310 aa) fasta scores: E(): 4.1e-25, 30.84% id in 308 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.746
BPSL2733
Putative LysR-family transcriptional regulator; Similar to Ralstonia solanacearum probable transcription regulator protein rsc0065 or rs02244 SWALL:Q8Y3B5 (EMBL:AL646057) (312 aa) fasta scores: E(): 2.4e-34, 35.55% id in 315 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0159 SWALL:Q9I6X3 (EMBL:AE004454) (312 aa) fasta scores: E(): 9.6e-32, 38.14% id in 291 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.713
BPSS0861
LysR family regulatory protein; Similar to Pseudomonas aeruginosa transcriptional regulator PtxR SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 3.5e-31, 36.98% id in 292 aa, and to Yersinia pestis LysR-family transcriptional regulatory protein ypo0799 SWALL:Q8ZHT5 (EMBL:AJ414144) (302 aa) fasta scores: E(): 1.4e-61, 54.2% id in 297 aa.
  
     0.690
BPSL0835
Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2316 SWALL:Q9I1F9 (EMBL:AE004657) (297 aa) fasta scores: E(): 1.4e-77, 68.02% id in 294 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu4271 or agr_l_1183 SWALL:Q8U828 (EMBL:AE009356) (295 aa) fasta scores: E(): 4.5e-54, 50% id in 294 aa, and to Rhizobium loti transcriptional regulator mll2784 SWALL:Q98HN8 (EMBL:AP003000) (307 aa) fasta scores: E(): 4.1e-53, 50.5% id in 295 aa; downstream repeat region (gcg)4; Belongs to the LysR transcriptional regulatory family.
  
     0.659
BPSL1748
Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1328 SWALL:Q9I416 (EMBL:AE004562) (302 aa) fasta scores: E(): 3.2e-75, 67.79% id in 295 aa, and to Rhizobium meliloti putative transcription regulator protein r00290 or smc00370 SWALL:Q92SS5 (EMBL:AL591783) (296 aa) fasta scores: E(): 9.7e-34, 38.3% id in 295 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.659
BPSS1255
Conserved hypothetical protein (fragment); Similar to N-terminus of Caulobacter crescentus aspartate racemase cc3278 SWALL:Q9A3C6 (EMBL:AE005991) (253 aa) fasta scores: E(): 1e-09, 46.49% id in 114 aa, and to N-terminus of Rhizobium loti aspartate racemase mll4070 SWALL:Q98EV2 (EMBL:AP003003) (231 aa) fasta scores: E(): 7.8e-08, 38.98% id in 118 aa, and to N-terminus of Xanthomonas axonopodis putative resistance protein YgeA or xac1802 SWALL:AAM36665 (EMBL:AE011812) (234 aa) fasta scores: E(): 9.1e-08, 42.24% id in 116 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.640
BPSS2207
Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 4e-38, 37.17% id in 304 aa, and to Pseudomonas sp. putative transcriptional regulator ORF99 SWALL:Q936X4 (EMBL:U66917) (322 aa) fasta scores: E(): 4.8e-19, 34.25% id in 289 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.634
BPSL0418
LysR family regulatory protein; Similar to Rhizobium loti transcriptional regulator mlr2977 SWALL:Q98H90 (EMBL:AP003000) (299 aa) fasta scores: E(): 3.2e-24, 32.88% id in 298 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 9e-24, 29.83% id in 295 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.609
BPSL1680
Putative LysR-family transcriptional regulatory protein; Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-28, 35.95% id in 292 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 6.5e-30, 38.72% id in 297 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.597
BPSS0155
Putative LysR-family transcriptional regulator; Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-16, 34.95% id in 246 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 1.7e-30, 41.58% id in 291 aa; Belongs to the LysR transcriptional regulatory family.
  
     0.577
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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