Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BPSS0988 | pchD | BPSS0988 | BPSS0584 | Putative membrane protein; Possible alternative translational start site. Similar to Bradyrhizobium japonicum putative inner membrane protein SpcT SWALL:Q9RH56 (EMBL:AF065159) (411 aa) fasta scores: E(): 1.2e-61, 51.97% id in 406 aa, and to Streptomyces spectabilis export protein SpcT SWALL:Q9L629 (EMBL:AF244574) (432 aa) fasta scores: E(): 3.2e-26, 31.02% id in 419 aa. | salicyl-AMP ligase; Similar to Pseudomonas aeruginosa salicyl-AMP ligase PchD SWALL:Q9RFM9 (EMBL:AF184620) (547 aa) fasta scores: E(): 1.6e-152, 69.33% id in 538 aa, and to Bacillus subtilis 2,3-dihydroxybenzoate-AMP ligase DhbE or EntE SWALL:DHBE_BACSU (SWALL:P40871) (539 aa) fasta scores: E(): 2.8e-112, 54.63% id in 529 aa. | 0.403 |
| pchD | BPSS0988 | BPSS0584 | BPSS0988 | salicyl-AMP ligase; Similar to Pseudomonas aeruginosa salicyl-AMP ligase PchD SWALL:Q9RFM9 (EMBL:AF184620) (547 aa) fasta scores: E(): 1.6e-152, 69.33% id in 538 aa, and to Bacillus subtilis 2,3-dihydroxybenzoate-AMP ligase DhbE or EntE SWALL:DHBE_BACSU (SWALL:P40871) (539 aa) fasta scores: E(): 2.8e-112, 54.63% id in 529 aa. | Putative membrane protein; Possible alternative translational start site. Similar to Bradyrhizobium japonicum putative inner membrane protein SpcT SWALL:Q9RH56 (EMBL:AF065159) (411 aa) fasta scores: E(): 1.2e-61, 51.97% id in 406 aa, and to Streptomyces spectabilis export protein SpcT SWALL:Q9L629 (EMBL:AF244574) (432 aa) fasta scores: E(): 3.2e-26, 31.02% id in 419 aa. | 0.403 |