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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1237Putative AraC family transcriptional activator protein; Similar to Pseudomonas fluorescens activator protein mtlR SWALL:O52770 (EMBL:AF047527) (301 aa) fasta scores: E(): 1.2e-38, 39.33% id in 300 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 3.9e-51, 46.29% id in 283 aa. (332 aa)    
Predicted Functional Partners:
BPSS1235
Putative zinc-binding xylitol/sorbitol dehydrogenase; Similar to Candida sp. HA167 xylitol dehydrogenase Xdh SWALL:O74230 (EMBL:AF072541) (353 aa) fasta scores: E(): 2.5e-40, 40.95% id in 337 aa, and to Agrobacterium tumefaciens xylitol dehydrogenase atu4318 or agr_l_1091 SWALL:Q8U7Y1 (EMBL:AE009360) (350 aa) fasta scores: E(): 1.1e-78, 62.35% id in 348 aa, and to Rhizobium loti xylitol mlr4915 SWALL:Q98D10 (EMBL:AP003005) (348 aa) fasta scores: E(): 1.2e-76, 62.75% id in 341 aa.
 
     0.818
xylB
Putative sugar carbohydrate kinase; Similar to Klebsiella pneumoniae D-xylulose-kinase DalK SWALL:O52719 (EMBL:AF045245) (487 aa) fasta scores: E(): 4.7e-98, 52.92% id in 478 aa, and to Ralstonia solanacearum putative D-arabinitol kinase protein DalK or rsc2128 or rs01476 SWALL:Q8XXI5 (EMBL:AL646068) (491 aa) fasta scores: E(): 9.3e-100, 55.8% id in 482 aa.
 
   
 0.814
BPSS1236
Putative sugar transporter ATP-binding protein; Similar to Bacillus pseudofirmus maltose transportor ATP-binding protein malK SWALL:O87551 (EMBL:AF084104) (366 aa) fasta scores: E(): 1.3e-51, 50.14% id in 355 aa, and to Rhizobium loti sugar ABC transporter, ATP-binding protein mlr4917 SWALL:Q98D09 (EMBL:AP003005) (363 aa) fasta scores: E(): 1.2e-60, 58.21% id in 347 aa, and to Brucella melitensis maltose/maltodextrin transport ATP-binding protein malK bmeI1713 SWALL:Q8YF14 (EMBL:AE009605) (363 aa) fasta scores: E(): 2.3e-55, 53.46% id in 361 aa.
       0.773
BPSS1233
Putative binding-protein-dependent transport system protein; Similar to Streptococcus pneumoniae putative binding protein dependent ORF-3 SWALL:Q54725 (EMBL:U43526) (294 aa) fasta scores: E(): 4.9e-26, 31.93% id in 285 aa, and to Rhizobium loti sugar ABC transporter, permease protein mlr4912 SWALL:Q98D12 (EMBL:AP003005) (290 aa) fasta scores: E(): 1.9e-63, 60.77% id in 283 aa, and to Yersinia pestis similar to many ypo1894 or y2416 SWALL:Q9ZC23 (EMBL:AL031866) (286 aa) fasta scores: E(): 1.3e-31, 33.81% id in 278 aa.
       0.705
BPSS1234
Putative ABC transporter permease protein; Similar to Rhizobium meliloti ThuG or rb0313 or smb20327 SWALL:Q9R9Q5 (EMBL:AF175299) (276 aa) fasta scores: E(): 9.7e-24, 35.33% id in 266 aa, and to Rhizobium loti sugar ABC transporter, permease protein mlr4913 SWALL:Q98D11 (EMBL:AP003005) (276 aa) fasta scores: E(): 4.3e-58, 57.99% id in 269 aa, and to Pseudomonas fluorescens probable ABC transporter permease protein MtlG SWALL:O30493 (EMBL:AF007800) (276 aa) fasta scores: E(): 1.9e-26, 35.24% id in 261 aa.
       0.705
BPSS0436
Putative AraC-family regulatory protein; Similar to Rhizobium leguminosarum putative arac-like transcriptional regulator SWALL:Q93EA6 (EMBL:AF361470) (303 aa) fasta scores: E(): 1.6e-38, 38.92% id in 298 aa, and to Rhizobium leguminosarum putative arac-like transcriptional regulator SWALL:Q93EA7 (EMBL:AF361470) (306 aa) fasta scores: E(): 3.7e-14, 26.88% id in 305 aa.
  
     0.588
BPSS1232
Similar to Rhodobacter sphaeroides periplasmic sorbitol-binding protein smoE SWALL:O30831 (EMBL:AF018073) (436 aa) fasta scores: E(): 2.4e-22, 28.47% id in 432 aa, and to the C-terminus of Yersinia pestis hypothetical protein similar to af039956_5 sinorhizobium fredii ypo1893 or y2417 SWALL:Q9ZC22 (EMBL:AL031866) (422 aa) fasta scores: E(): 6.2e-37, 33.87% id in 434 aa, and to Rhizobium meliloti probable sorbitol-binding periplasmic protein smoE or r02445 or smc01496 SWALL:Q92N02 (EMBL:AL591790) (436 aa) fasta scores: E(): 2e-23, 29.13% id in 429 aa.
 
     0.514
BPSL0321
Similar to Xanthomonas campestris hypothetical protein xcc1510 SWALL:Q8PAH3 (EMBL:AE012251) (401 aa) fasta scores: E(): 1.8e-88, 59.11% id in 406 aa, and to Xylella fastidiosa hypothetical protein xf1611 SWALL:Q9PCZ3 (EMBL:AE003988) (401 aa) fasta scores: E(): 4.8e-86, 57.88% id in 406 aa. CDS is extended at the C-terminus in comparison to orthologues.
  
     0.488
BPSL2731
Putative AraC-family transcriptional regulatory protein; Similar to many proposed transcriptional regulators including: Ralstonia solanacearum probable transcription regulator protein rsp1157 or rs05428 SWALL:Q8XQR4 (EMBL:AL646083) (324 aa) fasta scores: E(): 8.9e-51, 47.41% id in 310 aa and Pseudomonas aeruginosa probable transcriptional regulator pa3898 SWALL:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 3.4e-49, 47.81% id in 297 aa.
  
     0.404
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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