STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1670Putative exported protein; Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3415 or agr_l_2813 SWALL:Q8UAF9 (EMBL:AE009272) (355 aa) fasta scores: E(): 3.3e-65, 58.11% id in 308 aa, and to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 3.9e-07, 26.89% id in 238 aa. Note: Also similar to BPSS1674 (329 aa) fasta scores: E(): 1.4e-51, 57.097% identity in 310 aa overlap. (311 aa)    
Predicted Functional Partners:
BPSS1671
Putative ABC transport system, ATP-binding protein; Similar in its full length to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3417 or agr_l_2810 SWALL:Q8UAF7 (EMBL:AE009272) (592 aa) fasta scores: E(): 1.6e-59, 66.61% id in 626 aa, and in its N-terminal region to Streptomyces coelicolor ATP-binding protein AtrC or sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL939123) (253 aa) fasta scores: E(): 2.3e-39, 59.83% id in 249 aa.
 
 
 0.850
BPSS1675
Putative acetyltransferase; Similar to Agrobacterium tumefaciens acetyltransferase atu3418 or agr_l_2808 SWALL:Q8UAF6 (EMBL:AE009272) (181 aa) fasta scores: E(): 1.4e-29, 52.22% id in 180 aa, and to Streptomyces coelicolor putative acetyltransferase sco3175 or sce87.26 SWALL:Q9RKB2 (EMBL:AL939115) (161 aa) fasta scores: E(): 2.7e-06, 32.39% id in 142 aa.
  
  
 0.756
BPSS1672
Putative monooxygenase; Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 1.9e-48, 37.77% id in 450 aa, and to Agrobacterium tumefaciens monooxygenase atu3420 or agr_l_2804 SWALL:Q8UAF4 (EMBL:AE009272) (453 aa) fasta scores: E(): 1.1e-124, 72.45% id in 432 aa.
  
    0.518
BPSS2265
Putative monooxygenase protein; Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 9.8e-53, 40.22% id in 455 aa, and to Agrobacterium tumefaciens monooxygenase ATU3420 or AGR_L_2804 SWALL:Q8UAF4 (EMBL:AE009272) (453 aa) fasta scores: E(): 3.2e-114, 63.71% id in 441 aa. Similar to BPSS1672, 64.865% identity (65.753% ungapped) in 444 aa overlap.
  
    0.470
BPSL1807
Putative amino acid transport system, membrane protein; Similar to Pseudomonas aeruginosa probable amino acid permease pa2202 SWALL:Q9I1R5 (EMBL:AE004646) (225 aa) fasta scores: E(): 1.7e-53, 67.11% id in 225 aa, and to Ralstonia solanacearum probable amino acid transmembrane ABC transporter protein rsp0933 or rs05400 SWALL:Q8XRC5 (EMBL:AL646081) (248 aa) fasta scores: E(): 2.2e-28, 41.52% id in 236 aa.
 
 
 0.469
BPSS1669
Putative membrane protein; Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0146 or rs01016 SWALL:Q8Y335 (EMBL:AL646057) (251 aa) fasta scores: E(): 2e-61, 59.6% id in 255 aa, and to Xanthomonas axonopodis hypothetical protein Xac1712 xac1712 SWALL:Q8PLS7 (EMBL:AE011803) (253 aa) fasta scores: E(): 2.8e-45, 50.78% id in 254 aa.
  
    0.434
glt1
Glutamate synthase large subunit; Similar to Synechocystis sp. ferredoxin-dependent glutamate synthase 2 GltS or Sll1499 SWALL:GLTS_SYNY3 (SWALL:P55038) (1556 aa) fasta scores: E(): 0, 43.8% id in 1573 aa, and to Ralstonia solanacearum probable glutamate synthase GltB or Rsc2965 or Rs01332 SWALL:Q8XV66 (EMBL:AL646072) (1582 aa) fasta scores: E(): 0, 83.76% id in 1564 aa.
     
 0.405
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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