STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1987Putative phosphesterase; No significant database matches. (540 aa)    
Predicted Functional Partners:
BPSS1986
Hypothetical protein; No significant database matches.
       0.773
BPSS1988
Hypothetical protein; No significant database matches.
       0.773
BPSS1989
Similar to Streptomyces coelicolor hypothetical protein sco7155 or sc9a4.17 SWALL:Q9FBT7 (EMBL:AL939130) (355 aa) fasta scores: E(): 5.4e-20, 32.93% id in 334 aa, and to Anabaena sp. hypothetical protein alr1577 SWALL:Q8YWM8 (EMBL:AP003586) (366 aa) fasta scores: E(): 3.6e-07, 28.19% id in 376 aa.
       0.701
BPSS1984
Hypothetical protein; No significant database matches.
       0.631
BPSS1985
Hypothetical protein; No significant database matches.
       0.631
BPSL1440
Putative exported protein; Similar to Ralstonia solanacearum probable ankyrin repeat harboring signal peptide protein rsc1788 or rs04187 SWALL:Q8XYH0 (EMBL:AL646066) (291 aa) fasta scores: E(): 9.2e-29, 45.74% id in 223 aa, and to the N-terminal region of Oryza sativa putative ankyrin osjnba0040e01.26 SWALL:Q9AUW0 (EMBL:AC079887) (252 aa) fasta scores: E(): 3.7e-09, 33% id in 203 aa. Note: Most of the database matches in this CDS are to the N-terminal region of ankyrin-related eukaryotic proteins.
   
 
 0.607
BPSS0013
Putative membrane protein; Similar to Methanosarcina acetivorans hypothetical protein ma2467 SWALL:Q8TN26 (EMBL:AE010940) (237 aa) fasta scores: E(): 2.4e-28, 35.37% id in 229 aa, and to Rhizobium loti hypothetical protein mll0909 SWALL:Q98LR8 (EMBL:AP002996) (244 aa) fasta scores: E(): 9.6e-21, 31.6% id in 212 aa.
 
     0.542
BPSS0409
Hypothetical protein; No significant database matches.
  
     0.532
BPSL1455
Similar to Ralstonia solanacearum hypothetical protein rsp1652 or rs02211 SWALL:Q8XPI8 (EMBL:AL646086) (309 aa) fasta scores: E(): 1.5e-79, 69.9% id in 299 aa, and to Agrobacterium tumefaciens hypothetical protein atu2243 or agr_c_4081 SWALL:Q8UD84 (EMBL:AE009174) (291 aa) fasta scores: E(): 2.6e-08, 30.14% id in 209 aa.
  
     0.477
BPSS1983
Putative deoxyribonuclease; Similar to eukaryotic proteins as Sus scrofa deoxyribonuclease II precursor DNAse2 or Dnl2 SWALL:DRN2_PIG (SWALL:O62855) (364 aa) fasta scores: E(): 1.8e-26, 30.55% id in 360 aa, and to Homo sapiens deoxyribonuclease II precursor DNAse2 or Dnl2 SWALL:DRN2_HUMAN (SWALL:O00115) (360 aa) fasta scores: E(): 5e-26, 29.32% id in 324 aa.
       0.471
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.