STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS2111Putative monooxygenase; Similar to Bradyrhizobium japonicum USDA 110 BLL2502 protein SWALL:Q89SA3 (EMBL:AP005944) (428 aa) fasta scores: E(): 9.2e-53, 42.39% id in 401 aa, and to Rhodopseudomonas palustris possible FAD-dependent monooxygenase SWALL:Q6N3V5 (EMBL:BX572604) (430 aa) fasta scores: E(): 2.6e-44, 37.79% id in 426 aa. (414 aa)    
Predicted Functional Partners:
BPSS0680
Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit IorA SWALL:IORA_BREDI (SWALL:Q51697) (152 aa) fasta scores: E(): 5e-32, 58.62% id in 145 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1881 SWALL:Q9I2L6 (EMBL:AE004614) (153 aa) fasta scores: E(): 1e-50, 84.96% id in 153 aa.
  
  
 0.698
BPSS1654
Cytochrome P450; Similar to Rhodococcus sp. NCIMB 9784 cytochrome P450 Rhf p450rhF SWALL:Q8KU27 (EMBL:AF459424) (773 aa) fasta scores: E(): 8.5e-183, 62.83% id in 783 aa, and to Rhodococcus erythropolis cytochrome p450 116 ThcB or Cyp116 SWALL:THCB_RHOER (SWALL:P43492) (436 aa) fasta scores: E(): 1.1e-88, 56.08% id in 419 aa.
 
 
 0.632
BPSS0487
Hypothetical protein; No significant database matches.
      
 0.630
BPSL2651
Putative exported protein; Similar to Ralstonia solanacearum putative urea/short-chain amide-binding signal peptide protein rsc2041 or rs03606 SWALL:Q8XXS2 (EMBL:AL646067) (418 aa) fasta scores: E(): 7.9e-133, 82.61% id in 420 aa and to Yersinia pestis putative substrate-binding periplasmic transport protein ypo1187 SWALL:Q8ZGU0 (EMBL:AJ414147) (422 aa) fasta scores: E(): 8.5e-121, 76.42% id in 420 aa.
   
  
 0.602
BPSS0481
Putative CoA ligase; Similar to Azoarcus evansii 2-aminobenzoate-CoA ligase SWALL:Q93FC0 (EMBL:AF320253) (542 aa) fasta scores: E(): 2.6e-119, 57.35% id in 537 aa, and to Bacillus subtilis long-chain-fatty-acid--CoA ligase LcfA SWALL:LCFA_BACSU (SWALL:P94547) (560 aa) fasta scores: E(): 1.9e-31, 29.07% id in 564 aa.
  
  
 0.599
BPSS0130
Putative peptide synthase protein; Similar in its full length to Ralstonia solanacearum putative peptide synthase protein rsp1419 or rs03122 SWALL:Q8XQ67 (EMBL:AL646084) (937 aa) fasta scores: E(): 0, 61.11% id in 936 aa, and in its N-terminal region to Bacillus subtilis putative polyketide synthase PksJ SWALL:PKSJ_BACSU (SWALL:P40806) (557 aa) fasta scores: E(): 8.8e-64, 35.95% id in 534 aa.
   
  
 0.583
BPSL2532
Similar to many oxygenases including: Streptomyces argillaceus oxygenase MtmOII SWALL:O86481 (EMBL:AJ007932) (531 aa) fasta scores: E(): 3.8e-43, 37.09% id in 558 aa and Flavobacterium sp. PcpB pcpB SWALL:Q53961 (EMBL:U60175) (538 aa) fasta scores: E(): 7.1e-40, 32.86% id in 563 aa, and to Flavobacterium sp. PcpB pcpB SWALL:AAF15368 (EMBL:U12290) (538 aa) fasta scores: E(): 1.5e-38, 32.78% id in 549 aa.
  
   
 0.533
BPSS1002
Similar to Myxococcus xanthus ACP synthase (KAS III) homologue Tac SWALL:Q9XB06 (EMBL:AJ132503) (420 aa) fasta scores: E(): 8.3e-121, 67.78% id in 419 aa, and to Yersinia pestis putative hydroxymethylglutaryl-coenzyme A synthase ypo1457 SWALL:Q8ZG58 (EMBL:AJ414148) (412 aa) fasta scores: E(): 2e-33, 32.78% id in 424 aa. Weakly similar to the N-terminal region of Gallus gallus cytoplasmic hydroxymethylglutaryl-CoA synthase HMGCS SWALL:HMCS_CHICK (SWALL:P23228) (522 aa) fasta scores: E(): 4.3e-05, 25.9% id in 471 aa.
  
  
 0.533
BPSL2742
Similar to many oxidoreductases including: Ralstonia solanacearum hypothetical oxidoreductase protein rsp0702 or rs01747 SWALL:Q8XRX9 (EMBL:AL646080) (563 aa) fasta scores: E(): 7e-141, 68.89% id in 553 aa, and to Escherichia coli 3-(3-hydroxy-phenyl)propionate mhpa or b0347 SWALL:MHPA_ECOLI (SWALL:P77397) (554 aa) fasta scores: E(): 9.2e-22, 26.78% id in 519 aa.
  
   
 0.515
BPSS0884
Hypothetical protein; No significant database matches.
   
  
 0.509
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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