node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BPSS2351 | rplM | BPSS2351 | BPSL2911 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.952 |
BPSS2351 | rplU | BPSS2351 | BPSL3005 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.962 |
BPSS2351 | rpmB | BPSS2351 | BPSL0916 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 50S ribosomal protein L28; Similar to Escherichia coli, and Escherichia coli O157:H7 50S ribosomal protein L28 RpmB or b3637 or z5061 or ecs4512 SWALL:RL28_ECOLI (SWALL:P02428) (77 aa) fasta scores: E(): 1.1e-20, 73.33% id in 75 aa, and to Ralstonia solanacearum 50S ribosomal protein L28 RpmB or rsc2445 or rs01349 SWALL:RL28_RALSO (SWALL:Q8XWM9) (77 aa) fasta scores: E(): 1.1e-28, 94.73% id in 76 aa, and to Neisseria meningitidis 50S ribosomal protein L28 RpmB or nma2166 or nmb0321 SWALL:RL28_NEIMA (SWALL:Q9JQQ3) (77 aa) fasta scores: E(): 1.7e-27, 90.9% id in 77 aa; Belongs to the bac [...] | 0.962 |
BPSS2351 | rpmF | BPSS2351 | BPSL2444 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 50S ribosomal protein L32; Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi 50S ribosomal protein L32 RpmF SWALL:RL32_ECOLI (SWALL:P02435) (56 aa) fasta scores: E(): 2.7e-11, 62.96% id in 54 aa, and to Ralstonia solanacearum 50S ribosomal protein L32 rsc1048 or rs04194 SWALL:RL32_RALSO (SWALL:Q8Y0J6) (58 aa) fasta scores: E(): 9.8e-22, 87.93% id in 58 aa; Belongs to the bacterial ribosomal protein bL32 family. | 0.952 |
BPSS2351 | rpmI | BPSS2351 | BPSL1943 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 50S ribosomal protein L35; Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi 50S ribosomal protein L35 RpmI or b1717 or z2746 or ecs2424 or stm1335 or sty1776 SWALL:RL35_ECOLI (SWALL:P07085) (64 aa) fasta scores: E(): 1.1e-07, 53.12% id in 64 aa, and to Ralstonia solanacearum 50S ribosomal protein L35 rsc1579 or rs03941 SWALL:RL35_RALSO (SWALL:Q8XZ27) (65 aa) fasta scores: E(): 9.7e-21, 78.46% id in 65 aa; Belongs to the bacterial ribosomal protein bL35 family. | 0.946 |
BPSS2351 | rpmJ | BPSS2351 | BPSL3191 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | Similar to Escherichia coli 50S ribosomal protein L36 RpmJ or b3299 or z4669 or ecs4164 or stm3419 or sty4379 SWALL:RL36_ECOLI (SWALL:P21194) (38 aa) fasta scores: E(): 3.1e-12, 76.31% id in 38 aa; Belongs to the bacterial ribosomal protein bL36 family. | 0.940 |
BPSS2351 | rpsN | BPSS2351 | BPSL3200 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.942 |
BPSS2351 | rpsO | BPSS2351 | BPSL1206 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.945 |
BPSS2351 | rpsP | BPSS2351 | BPSL2492 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 30S ribosomal protein S16; Similar to Escherichia coli, and Escherichia coli O157:H7 30S ribosomal protein S16 RpsP SWALL:RS16_ECOLI (SWALL:P02372) (82 aa) fasta scores: E(): 1.1e-15, 58.02% id in 81 aa, and to Ralstonia solanacearum 30S ribosomal protein S16 rsc0933 or rs04481 SWALL:RS16_RALSO (SWALL:Q8Y0W0) (84 aa) fasta scores: E(): 5.4e-26, 83.33% id in 84 aa; Belongs to the bacterial ribosomal protein bS16 family. | 0.953 |
BPSS2351 | rpsT | BPSS2351 | BPSL0871 | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | Putative 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.961 |
rplM | BPSS2351 | BPSL2911 | BPSS2351 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa. | 0.952 |
rplM | rplU | BPSL2911 | BPSL3005 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
rplM | rpmB | BPSL2911 | BPSL0916 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L28; Similar to Escherichia coli, and Escherichia coli O157:H7 50S ribosomal protein L28 RpmB or b3637 or z5061 or ecs4512 SWALL:RL28_ECOLI (SWALL:P02428) (77 aa) fasta scores: E(): 1.1e-20, 73.33% id in 75 aa, and to Ralstonia solanacearum 50S ribosomal protein L28 RpmB or rsc2445 or rs01349 SWALL:RL28_RALSO (SWALL:Q8XWM9) (77 aa) fasta scores: E(): 1.1e-28, 94.73% id in 76 aa, and to Neisseria meningitidis 50S ribosomal protein L28 RpmB or nma2166 or nmb0321 SWALL:RL28_NEIMA (SWALL:Q9JQQ3) (77 aa) fasta scores: E(): 1.7e-27, 90.9% id in 77 aa; Belongs to the bac [...] | 0.994 |
rplM | rpmF | BPSL2911 | BPSL2444 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L32; Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi 50S ribosomal protein L32 RpmF SWALL:RL32_ECOLI (SWALL:P02435) (56 aa) fasta scores: E(): 2.7e-11, 62.96% id in 54 aa, and to Ralstonia solanacearum 50S ribosomal protein L32 rsc1048 or rs04194 SWALL:RL32_RALSO (SWALL:Q8Y0J6) (58 aa) fasta scores: E(): 9.8e-22, 87.93% id in 58 aa; Belongs to the bacterial ribosomal protein bL32 family. | 0.992 |
rplM | rpmI | BPSL2911 | BPSL1943 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L35; Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi 50S ribosomal protein L35 RpmI or b1717 or z2746 or ecs2424 or stm1335 or sty1776 SWALL:RL35_ECOLI (SWALL:P07085) (64 aa) fasta scores: E(): 1.1e-07, 53.12% id in 64 aa, and to Ralstonia solanacearum 50S ribosomal protein L35 rsc1579 or rs03941 SWALL:RL35_RALSO (SWALL:Q8XZ27) (65 aa) fasta scores: E(): 9.7e-21, 78.46% id in 65 aa; Belongs to the bacterial ribosomal protein bL35 family. | 0.993 |
rplM | rpmJ | BPSL2911 | BPSL3191 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Similar to Escherichia coli 50S ribosomal protein L36 RpmJ or b3299 or z4669 or ecs4164 or stm3419 or sty4379 SWALL:RL36_ECOLI (SWALL:P21194) (38 aa) fasta scores: E(): 3.1e-12, 76.31% id in 38 aa; Belongs to the bacterial ribosomal protein bL36 family. | 0.994 |
rplM | rpsN | BPSL2911 | BPSL3200 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.995 |
rplM | rpsO | BPSL2911 | BPSL1206 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rplM | rpsP | BPSL2911 | BPSL2492 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S16; Similar to Escherichia coli, and Escherichia coli O157:H7 30S ribosomal protein S16 RpsP SWALL:RS16_ECOLI (SWALL:P02372) (82 aa) fasta scores: E(): 1.1e-15, 58.02% id in 81 aa, and to Ralstonia solanacearum 30S ribosomal protein S16 rsc0933 or rs04481 SWALL:RS16_RALSO (SWALL:Q8Y0W0) (84 aa) fasta scores: E(): 5.4e-26, 83.33% id in 84 aa; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
rplM | rpsT | BPSL2911 | BPSL0871 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Putative 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.993 |