Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CA_C0139 | CA_C0140 | Predicted permease. | Predicted permease. | 0.922 |
CA_C0139 | CA_C0147 | Predicted permease. | ABC transporter, ATP-binding protein. | 0.760 |
CA_C0140 | CA_C0139 | Predicted permease. | Predicted permease. | 0.922 |
CA_C0140 | CA_C0147 | Predicted permease. | ABC transporter, ATP-binding protein. | 0.698 |
CA_C0146 | CA_C0147 | Related to ABC transporter permease component. | ABC transporter, ATP-binding protein. | 0.948 |
CA_C0147 | CA_C0139 | ABC transporter, ATP-binding protein. | Predicted permease. | 0.760 |
CA_C0147 | CA_C0140 | ABC transporter, ATP-binding protein. | Predicted permease. | 0.698 |
CA_C0147 | CA_C0146 | ABC transporter, ATP-binding protein. | Related to ABC transporter permease component. | 0.948 |
CA_C0147 | CA_C0690 | ABC transporter, ATP-binding protein. | Endoglucanase, aminopeptidase M42 family. | 0.633 |
CA_C0147 | CA_C2722 | ABC transporter, ATP-binding protein. | RCC1 repeats protein (beta propeller fold). | 0.700 |
CA_C0147 | CA_C2791 | ABC transporter, ATP-binding protein. | MoaA/NirJ family Fe-S oxidoreductase. | 0.596 |
CA_C0147 | CA_C3025 | ABC transporter, ATP-binding protein. | Conserved membrane protein, possible permease, YHCI B.subtilis ortholog. | 0.697 |
CA_C0147 | CA_C3268 | ABC transporter, ATP-binding protein. | Uncharacterized conserved membrane protein, possible MDR-type transporter. | 0.825 |
CA_C0147 | CA_C3322 | ABC transporter, ATP-binding protein. | Predicted acetyltransferase. | 0.704 |
CA_C0147 | CA_C3341 | ABC transporter, ATP-binding protein. | Multimeric flavodoxin WrbA family protein. | 0.613 |
CA_C0690 | CA_C0147 | Endoglucanase, aminopeptidase M42 family. | ABC transporter, ATP-binding protein. | 0.633 |
CA_C0690 | CA_C3322 | Endoglucanase, aminopeptidase M42 family. | Predicted acetyltransferase. | 0.626 |
CA_C2722 | CA_C0147 | RCC1 repeats protein (beta propeller fold). | ABC transporter, ATP-binding protein. | 0.700 |
CA_C2722 | CA_C2791 | RCC1 repeats protein (beta propeller fold). | MoaA/NirJ family Fe-S oxidoreductase. | 0.458 |
CA_C2722 | CA_C3341 | RCC1 repeats protein (beta propeller fold). | Multimeric flavodoxin WrbA family protein. | 0.451 |
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