Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CA_C1524 | CA_C1525 | CA_C1524 | CA_C1525 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Uncharacterized protein, homolog of PHNB E.coli. | 0.862 |
CA_C1524 | cheA | CA_C1524 | CA_C0118 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein cheA. | 0.886 |
CA_C1524 | cheA-2 | CA_C1524 | CA_C2220 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis histidine kinase, CheA (contains CheW-like adaptor domain). | 0.936 |
CA_C1524 | cheB | CA_C1524 | CA_C2222 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein CheB, (CheY-like receiver domain and methylesterase domain); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.848 |
CA_C1524 | cheR | CA_C1524 | CA_C0121 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein methyltransferase (cheR). | 0.821 |
CA_C1524 | cheR-2 | CA_C1524 | CA_C2221 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein methyltransferase, cheR. | 0.820 |
CA_C1524 | cheW | CA_C1524 | CA_C0119 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein cheW. | 0.872 |
CA_C1524 | cheW-2 | CA_C1524 | CA_C2217 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis signal transduction protein CheW. | 0.877 |
CA_C1524 | cheW-3 | CA_C1524 | CA_C2224 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein CheW. | 0.876 |
CA_C1524 | chev | CA_C1524 | CA_C1233 | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | Chemotaxis protein CheV ortholog (CheW-like adaptor domain and CheY-like reciever domain). | 0.875 |
CA_C1525 | CA_C1524 | CA_C1525 | CA_C1524 | Uncharacterized protein, homolog of PHNB E.coli. | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | 0.862 |
cheA | CA_C1524 | CA_C0118 | CA_C1524 | Chemotaxis protein cheA. | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer). | 0.886 |
cheA | cheA-2 | CA_C0118 | CA_C2220 | Chemotaxis protein cheA. | Chemotaxis histidine kinase, CheA (contains CheW-like adaptor domain). | 0.920 |
cheA | cheB | CA_C0118 | CA_C2222 | Chemotaxis protein cheA. | Chemotaxis protein CheB, (CheY-like receiver domain and methylesterase domain); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
cheA | cheR | CA_C0118 | CA_C0121 | Chemotaxis protein cheA. | Chemotaxis protein methyltransferase (cheR). | 0.982 |
cheA | cheR-2 | CA_C0118 | CA_C2221 | Chemotaxis protein cheA. | Chemotaxis protein methyltransferase, cheR. | 0.947 |
cheA | cheW | CA_C0118 | CA_C0119 | Chemotaxis protein cheA. | Chemotaxis protein cheW. | 0.999 |
cheA | cheW-2 | CA_C0118 | CA_C2217 | Chemotaxis protein cheA. | Chemotaxis signal transduction protein CheW. | 0.998 |
cheA | cheW-3 | CA_C0118 | CA_C2224 | Chemotaxis protein cheA. | Chemotaxis protein CheW. | 0.998 |
cheA | chev | CA_C0118 | CA_C1233 | Chemotaxis protein cheA. | Chemotaxis protein CheV ortholog (CheW-like adaptor domain and CheY-like reciever domain). | 0.998 |
page 1 of 5