STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C1640Uncharacterized protein, YQCG B.subtilis homolog; CF-7 family. (377 aa)    
Predicted Functional Partners:
CA_C1639
Hypothetical protein, CF-7 family.
  
    0.783
CA_C1638
Hypothetical protein, CF-37 family(almost identical).
       0.773
CA_C1641
Ankyrin repeats containing protein.
  
  
 0.764
CA_C1636
Uncharacterized protein, homolog of B. firmus (2654481).
       0.746
CA_C1637
Hypothetical protein, CF-12 family.
  
    0.743
CA_C1134
Phage related protein, YonF B.subtilis homolog.
   
    0.497
CA_C0537
Acetylxylan esterase, acyl-CoA esterase or GDSL lipase family, strong similarity to C-terminal region of endoglucanase E precursor.
   
 
 0.489
CA_C2619
Acyl-CoA thioesterase family protein.
   
 
 0.489
CA_C3024
acyl-CoA thioesterase family protein.
   
 
 0.489
CA_C3448
Probable tesA-like protease.
   
 
 0.489
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.