STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C2181Hypothetical protein. (95 aa)    
Predicted Functional Partners:
CA_C2182
Hypothetical protein.
  
    0.661
CA_C1561
Glycosyltransferases, involved in cell wall biogenesis.
   
    0.626
CA_C2189
Carbamoylphosphate synthase large subunit, short form.
   
    0.626
CA_C2193
Ucharacterized protein, CGEB homolog.
   
    0.602
CA_C2184
Uncharacterized protein, homolog HI1244 from Haemophilus influenzae.
  
    0.491
CA_C2188
Protein containing a domain related to multimeric flavodoxin WrbA family.
   
    0.465
CA_C2617
Membrane associated methyl-chemotaxis protein, HAMP domain containing.
   
    0.465
CA_C0052
Hypothetical protein, CF-18 family.
   
    0.451
CA_C1465
Transcriptional regulator, MarR/EmrR family.
   
    0.440
fcl
Nucleoside-diphosphate-sugar epimerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
    0.419
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.