STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C3711Hypothetical protein. (90 aa)    
Predicted Functional Partners:
CA_C3712
Hypothetical protein.
  
    0.991
CA_C3710
Uncharacterized protein, YUKC B.subtilis homolog.
  
    0.811
CA_C3708
Hypothetical protein.
  
    0.808
CA_C3706
Hypothetical protein, CF-12 family.
  
    0.805
CA_C3709
DNA segregation ATPase, FtsK/SpoIIIE family, YUKA B.subtilis ortholog.
  
    0.805
CA_C3707
Uncharacterized protein, homolog of Bacillus firmus (gi:2654481).
  
    0.796
CA_C3713
Uncharacterized conserved protein, yukE/yfjA B.subtilis family; Belongs to the WXG100 family. sagEsxA-like subfamily.
  
    0.790
CA_C3704
Hypothetical protein, CF-7 family.
  
    0.781
CA_C3705
Hypothetical protein, CF-37 family(almost identical).
  
    0.773
CA_C3703
Hypothetical protein.
  
    0.742
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.