STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAJ66958.1Glycine/sarcosine/betaine reductase b. (172 aa)    
Predicted Functional Partners:
CAJ66957.1
PTS system, lactose/cellobiose-family IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
     0.883
CAJ66959.1
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase.
 
    0.826
CAJ68608.1
Glycine/sarcosine/betaine reductase complex,protein B, alpha and beta subunits.
 
  
 0.796
grdA
Glycine reductase complex selenoprotein A (selenocysteine).
 
   
 0.794
grdE
Glycine reductase complex component B subunits alpha and beta (Selenoprotein PB alpha/beta) [Contains: Betaine reductase component B subunit beta; Betaine reductase component B subunit alpha].
 
   
 0.779
grdC
Glycine reductase complex component C subunit beta (Protein PC beta).
 
   
 0.763
grdD
Glycine reductase complex component C subunit alpha (Protein PC alpha); Experimentally verified as part of mature spore proteome PMID:19542279.
 
   
 0.759
CAJ66956.1
PTS system, lactose/cellobiose-family IIB component.
 
    0.747
grdX
Putative glycine reductase complex component.
 
   
 0.693
CAJ66960.1
Putative peptidase.
 
    0.675
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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